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Although we are often interested in the dynamics over time, there are also methods that are targeted on determining the final size of epidemics e.g. [doi:10.1016/j.jtbi.2014.11.029](http://dx.doi.org/…
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Dear Bio++,
For a scientific problem, me and my students developed classes `LTT` (lineages through time) and `nLTT` (normalized LTT) and unit tests, with the goal of using the nLTT statistic (from …
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How do we handle the situation where we reach the transmission event for a sampled host, and we want the lineage(s) to be transferred from an unsampled host? What does the transmission rate mean in t…
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The population genetic model (the particular form of structured coalescent) is highly idealised and this may influence the quantitative conclusions, although we suspect the conclusions are quite robus…
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When setting interval = 1 in `incidence()`, I can get a perfect daily incidence; however, setting interval = 7 can produce a weekly incidence, dates of which are not corresponding to [ISO week](https…
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Put together lecture on forecasting. This extrapolates from previous lectures on serology, timeseries and phylogenetics. Include both epi and evolutionary components. We have this down for mostly Sara…
trvrb updated
8 years ago
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Expect that intense peak-tough dynamics of H3 prevents persistence. We observe persistence in Vic in years _without_ strong epidemics.
trvrb updated
10 years ago
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Original ticket https://networkx.lanl.gov/trac/ticket/706
Reported 2012-03-17 by hhchen, assigned to @hagberg.
Two famous diffusion models are implemented: Independent Cascade (IC) model and Linear T…
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Hi!
I haven't managed to fix an issue with sunspot, where I can't index objects with accented characters in their content.
I'm using sunspot 1.3.1, sunspot-rails 1.3.1, sunspot-solr 2.0.0pre (to get…
jure updated
10 years ago
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Nas citações em bloco, a apresentação das referências é duplicada.
![citao_ref](https://f.cloud.github.com/assets/912953/871824/68947b50-f855-11e2-8e1b-ba447a11e923.png)