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@Clare72 (FlyBase) has kindly started a review of alignments between DPO and PHIPO. Here are her notes:
DPO | PHIPO | Label DPO | Label PHIPO | Alignment | Note
-- | -- | -- | -- | -- | --
FBcv_0…
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For the sentence: "Cells are obligatory anaerobic, Gram-reaction-positive, non-motile cocci, ~0.8−1.0 µm, occurring in pairs and chains of 3–10 cells"
MicroPIE is extracting "−1.0 µm," for the cell…
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This should be automated somehow. All new interaction annotations will come from Canto. That may help as those annotations always have dates attached.
Original comment by: kimrutherford
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Reactome
http://amigo.geneontology.org/amigo/gene_product/UniProtKB:P62979
http://amigo.geneontology.org/amigo/gene_product/UniProtKB:P62987
About 90 annotations for both spanning many processe…
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I realise no AmiGO work is going on right now but I have been meaning to report this for a while.
This is an example that I think it clear.
I am looking at the gene products annotated to the GO…
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if this is possible...
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Please provide as much information as you can:
* **Suggested term label:**
inositol pyrophosphate sensor activity
* **Definition (free text)**
Binding to and responding, e.g. by confor…
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* **Guidelines**
See http://wiki.geneontology.org/index.php/Guidelines_for_GO_textual_definitions#Use_genus-differentia_patterns_for_definitions
More details at https://douroucouli.wordpress.com/201…
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I read quite a few papers today that refer to "Transcriptional gene silencing (TGS)
This used to be an independent term, but it is now a synonym of heterochromatin assembly, but it seems narrower.…
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When I try to search for all DNA-binding transcription factors
this annotation is the first in the list
URS00001B341F_9606 | Homo sapiens (human) hsa-miR-27a-5p | | negative regulation of NF-k…