-
Hi @BryanGuillaume ,
As the use of SwE is growing, with @TomMaullin, we've been looking at doing several updates to SwE to improve usability.
This is the beginning of a discussion on how to rat…
-
Hi
I obtained
P | **PermP** | **FWER** | BETA
4.20X10-06 | **9.99X10-05** | **9.99X10-05** | 0.000185
the PermP and FWER are identical is this possible?
Thanks!
-
In the following WDL, **GSEA_v_1_0_fwer_p_val_threshold** was not declared as an input, but the validator didn't raise an error. Cromwell choked when trying to run the task.
Is there a reason wdltool…
-
People seem to have trouble using our stats code. I think the biggest problem is that our explanations are not so clear. Maybe there are some API simplifications we could make, too, but hopefully rewr…
-
I am trying to replicate some of my previous results that I have found with NPM using the lesymap toolbox, but I am getting strange outputs depending on what I set for the multiple comparisons option.…
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: AdditionalPackage: https://github.com/mshasan/OPWpaper
Confirm the f…
-
This is currently available in Julia via https://github.com/dirkschumacher/PValueAdjust.jl
Given that the functionality for calculating p values lives here in HypothesisTests, I thought it would be…
-
\!obi:OBI\_0200033 "leave one out cross validation method"
\!obi:OBI\_0200183 "scaling objective"
\!obi:OBI\_0200066 "Holm false discovery rate correction method"
\!obi:OBI\_0302868 "mean-centered …
-
We could implement the following corrections for multiple comparisons in the toolbox:
- Bonferroni
- Bonferroni-Holm method
- False Discovery Rate correction (Benjamini-Hochberg procedure)
- Cluster-…
Feugs updated
8 years ago
-
Hi,
I am using derfinder to compare two groups of samples (31 vs 17) and I want to optimize (and understand) my statistics. However, it is not clear to me how this is built in analyzeChr().
As it i…