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Unlike pplace and old RAxML-EPA, epa-ng re-computes the placements of identical sequences. This is not necessary.
Possible solution: Store hashes of the sequences that have already been processed.…
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Hi Diego,
A ParGenes user (in case you don't know about it, ParGenes is a parallel pipeline that calls modeltest-ng and raxml-ng) got the following error in one modeltest run:
```
Integer divid…
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This library allows to detect trees with exactly the same likelihood as the ML tree but with different topologies. Usefully to report multiple equally good ML trees.
@upsj, @stamatak
Code: https:/…
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From the Bro team:
```
We announce the release of Bro v2.5.5. The new version is now available
for download at:
https://bro.org/download/index.html
or directly at:
https://www.bro.…
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Hello,
Thanks for developing and maintaining this fascinating method.
I want to search an ML tree in my population data. I know it will be very difficult to converge into a bifurcating tree, bu…
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Program produces following error message when started with large volume of queries (in this case half a TB, 100M neotrop sequences):
```INFO 390625 Sequences done!
INFO Output file: /hits/basement…
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Hi,
I am getting an error but not sure what it means:
Examl-OMP-AVX: treeIO.c:907: treeReadLen: Assertion `tr->ntips == tr->mxtips' failed.
[s4:161245] *** Process received signal ***
[s4:1612…
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To speed up data entry and to help with consistency I would like a pull down option for the
Type specimen repository field: Antwiki has the best list (pasted below):
http://www.antwiki.org/wiki/F…
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Though the following is fine
```
: descr
(1) premise
--
Some inference rule (Some additional info: 1,2)
--
(4) conclusion
```
the next two examples are throwing parser errors
```
:…