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amkozlov
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raxml-ng
RAxML Next Generation: faster, easier-to-use and more flexible
GNU Affero General Public License v3.0
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Raxml-ng behavior regarding alignment sites
#185
aghozlane
closed
1 week ago
1
Duplications don't cluster after ancestral tree reconstruction
#184
ceren-yildirim
closed
1 month ago
5
BL opt converged to a worse likelihood score
#183
fluttercork
opened
1 month ago
10
Substitution rates
#182
liamxg
closed
1 month ago
3
Making tree from large dataset
#181
kevinmyers
closed
1 month ago
8
Add raxml-ng in apt
#180
aghozlane
opened
3 months ago
0
Too many samples on a long branch in a rooted tree containing three outgroup tips
#179
QianGuoPKU
closed
4 months ago
1
why the number is from #2 to #1?
#178
BEAST-Community
closed
4 months ago
2
Binary data input format
#177
maggiesudo
closed
4 months ago
6
What is the different between G4 and G4m, thanks.
#176
liamxg
closed
4 months ago
1
tbe values when using a constraint tree
#175
padpadpadpad
closed
1 month ago
1
which software and parameters should I use to construct a good ml tree?
#174
liamxg
closed
4 months ago
1
masked missing positions
#173
TCHeaven
closed
1 month ago
1
can raxml-ng handle 6 million genomes of SARS-CoV-2?
#172
liamxg
closed
5 months ago
4
Adaptive RAxML-NG v1.0 + libpll2 -> coraxlib
#171
togkousa
closed
6 months ago
0
libc++abi: terminating with uncaught exception of type std::runtime_error: ERROR in SPR round (LIBPLL-3584): Constraint check failed after SPR round!
#170
rvosa
closed
1 month ago
8
Broken link for Mac M1 binary
#169
ChrisHIV
closed
6 months ago
1
Bus Error on Apple M1 Ultra Using RAxML-NG v. 1.2.0
#168
hushuzuiniu
opened
6 months ago
3
very very large dataset recomendations
#167
sapuizait
opened
6 months ago
2
BalancerStat Assertion failed?
#166
danieljrichard
opened
8 months ago
1
Allow for 3 taxon trees to be evaluated
#165
computations
closed
9 months ago
2
What libpll code is really needed
#164
tillea
opened
10 months ago
3
how to set the random start tree?
#163
liamxg
opened
10 months ago
0
all branch lengths always `0.000001` with CATG file
#162
dlaehnemann
closed
8 months ago
4
Error: assertion failed
#161
greektash
opened
11 months ago
9
`ERROR: vector::_M_default_append` when running on CATG file
#160
dlaehnemann
closed
11 months ago
9
catg files/core dumped
#159
gerhardJaeger
closed
1 year ago
10
`raxml-ng --parse` does not produce `.rba` file for a `.catg` file as `--msa` input in version 1.1.0
#158
dlaehnemann
closed
1 year ago
4
Add SPR round optimization by @togkousa
#157
amkozlov
closed
1 year ago
0
When I run raxml-ng v1.1, it stay in the stage of Starting ML tree search with 20 distinct starting trees for a longnight
#156
Dkaaaaa
opened
1 year ago
1
Add bootstrap values to phylogenetic tree
#155
asierFernandezP
closed
1 year ago
2
PARTITION FILE format - Error
#154
vcastroagudin
closed
1 year ago
1
Taxon names with invalid characters
#153
AndreaAguadoM
closed
1 year ago
2
terminate called recursively -- Aborted (core dumped)
#152
0xaf1f
opened
1 year ago
8
run --start execution mode in parallel
#151
tschuelia
closed
1 year ago
3
How can I reserve all the sequences
#150
YaoXinZhi
closed
1 year ago
0
Assertion failed: (new_loglikeliAssertion failed:...
#149
LemoAlex
opened
1 year ago
4
TOO FEW SPECIES
#148
Barrington-wustl
closed
1 year ago
3
Overcome the error: Constraint check failed after SPR round!
#147
padpadpadpad
closed
1 year ago
3
Error "'asprintf' was not declared in this scope" when building with MinGW-W64
#146
jdx-gh
opened
1 year ago
0
Wrong format specifier for size_t variables
#145
jdx-gh
closed
1 year ago
1
Continuous integration with Jenkins
#144
BerndDoser
closed
1 year ago
1
Assertion fails when building consensus tree
#143
BenoitMorel
closed
1 year ago
1
A problem when installing the raxml-ng in ARM HPC
#142
shengxinzhuan
opened
2 years ago
9
Compilation for non-AMD/Intel CPUs
#141
V-Z
closed
2 years ago
2
--nofiles option only prints params but not tree/s to terminal
#140
eaton-lab
opened
2 years ago
1
One thread per physical core? Poor performance compared to RAXML8 on cluster
#139
pierrj
closed
2 years ago
4
Wrong formal parameter name in function pllmod_set_error() in <SOURCEDIR>\libs\pll-modules\src\pllmod_common.{c,h}
#138
jdx-gh
closed
1 year ago
2
MPI problems installing on Rocky Linux v8.4
#137
jpearl01
closed
2 years ago
2
Error: no matching function for call to 'max(size_t&, long unsigned int)'
#136
jdx-gh
closed
1 year ago
6
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