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I added a fake URL ID for deprecation.yaml.
"LinkML doesn't do "link checking" of the URLs in id slots or wherever else so technically you would be okay putting in a non-resolvable URL like here: …
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**Describe the bug**
Basically the linkml:Time type is given a URI of xsd:dateTime rather than xsd:time . I understand by the note on the type (below) that this is behaviour by design - but does Lin…
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The data is from this paper:
Exploring the functional composition of the human microbiome using a hand-curated microbial trait database
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s…
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**Describe the bug**
When instantiating a `SchemaDefinition` object with `annotations` like
```python
schema = SchemaDefinition(
# other stuff...
annotations = [
{'tag': 'my_annotation…
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BioCypher currently crashes on "Translating BioCypher config leaves to Biolink" step, e.g. in clean installation of [OTAR-BioCypher](https://github.com/saezlab/OTAR-BioCypher).
Stack trace:
```INF…
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CLI doesn't implement all features in code interface
> Usage: linkml-schema-fixer [OPTIONS] COMMAND [ARGS]...
>
> Apply schema-fixer commands.
>
> Options:
> -v, --verbose
> -q, --qui…
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As discussed in #19 we'll have at least two fields which are about a countries either of origin or acquisition currently `food_acquisition_country`, `food_origin_country`. We should create an enum for…
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```yaml
name: assumption_schema
id: http://example.com/assumption_schema
classes:
Assumption:
slots:
- assumes
slots:
assumes: {}
```
```shell
gen-doc -d docs assumption…
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When we were trying to generate the linkml schema for GA4GH VA in this repo: [ga4gh-va](https://github.com/sujaypatil96/ga4gh-va/), and you look at the source schema [here](https://github.com/sujaypat…
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Using the schemasheets functionality that exports a provided linkml schema to a schemasheets specific tsv file, based on a specification tsv file is incomplete. In that, it does not make the output ts…