linkml schema-automator issues

linkml / schema-automator

Automated assistance for the schema development lifecycle

https://linkml.io/schema-automator/

BSD 3-Clause "New" or "Revised" License

33 stars 12 forks source link

issues

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Add EML importer

#138 caufieldjh opened 1 week ago
0
Adding FHIR CodeSystem importer

#137 cmungall opened 1 week ago
0
kwalify importer

#136 cmungall closed 3 months ago
0
json_schema type not converting to linkml range

#135 proccaserra-az opened 3 months ago
0
Python 3.12 not supported

#134 Silvanoc opened 3 months ago
0
metamodel docs

#133 cmungall closed 3 months ago
0
cadsr importer

#132 cmungall closed 4 months ago
0
Add ingestors for CDEs

#131 cmungall closed 4 months ago
0
support allOf and anyOf in schema definitions

#130 satra opened 4 months ago
0
Add codespell config and workflow and fix a few typos

#129 yarikoptic closed 4 months ago
0
Adding myst parser

#128 cmungall closed 5 months ago
0
Ensure CURIEs generated from paths are valid on windows

#127 cmungall closed 5 months ago
0
Adding LLMAnnotator

#126 cmungall closed 5 months ago
0
OWL language tags not escaped

#125 sneakers-the-rat opened 5 months ago
0
Recognize inheritance patterns in json-schema to reconstruct class hierarchies

#124 cmungall opened 5 months ago
0
Lib (urllib3) fail from local poetry build

#123 dosumis opened 7 months ago
0
PyDantic update causes pip dependency's imcompatibility.

#122 LicoriceLin opened 7 months ago
1
Remove Bioregistry dependency and update OAK dependency

#121 cthoyt closed 5 months ago
4
problem caused by bioregistry pydantic usage

#120 manulera closed 5 months ago
7
Automatic model for JSON-to-RDF mapping based on a custom ontology

#119 danielbarta opened 12 months ago
1
Adding CLI option from import-from-frictionless.

#118 cmungall closed 1 year ago
0
Missing Schema When Reading in Turtle File

#117 Sulstice opened 1 year ago
1
Delete pre_poetry directory

#116 turbomam closed 1 year ago
0
Implement RDFS importer. Bypasses issues with #114

#115 cmungall closed 1 year ago
0
OWL importer ignores undeclared properties

#114 cmungall closed 1 year ago
1
Added ability to import multiple jsonschema files organized in a project.

#113 cmungall closed 1 year ago
1
Add tool for ingesting variables from dbgap

#112 cmungall opened 1 year ago
0
schemauto: command not found (Direct Installation)

#111 Sarra-Ouelhadj opened 1 year ago
2
generalize-tsv with (;) separator doesn't work properly

#110 Sarra-Ouelhadj opened 1 year ago
0
Schema automator for OMOP: concept_class_id falsely inferred as idenitifier

#109 matentzn opened 1 year ago
0
Using generalize-tsvs does not handle equal-named, different-mean columns correctly

#108 matentzn opened 1 year ago
2
CsvGeneralizer: Adding ability to interpret metadata rows - adding docs to parameters - expose more parameters in CLI - additional tests

#106 cmungall closed 1 year ago
0
Schema-automator is not yet 3.10 compatible.

#105 dalito closed 1 year ago
1
Windows fixes (make test suite pass on windows)

#104 dalito closed 1 year ago
5
recapitulate Biolink schema via KGX->LinkML schema-automator importer: handle categories

#103 sierra-moxon opened 1 year ago
0
jsonschema oneOf -> linkml:union_of (slightly different definitions?)

#107 sierra-moxon opened 1 year ago
2
Test

#102 matentzn closed 1 year ago
0
Fixes #99 (logging object contents when None

#101 matentzn closed 1 year ago
0
Trouble installing schema-automator into semantic-synbio/synbio-schema

#100 turbomam closed 1 year ago
3
Help with `AttributeError: 'NoneType' object has no attribute 'classes'`

#99 matentzn opened 1 year ago
6
OMOP test case: generalize-tsv

#98 matentzn closed 1 year ago
4
update oaklib to help with main branch test failures

#97 sierra-moxon closed 1 year ago
0
update dependencies fixes #95 fixes #97

#96 sierra-moxon closed 1 year ago
0
schema-automator has dependency conflicts when trying to install in a linkml-project-cookiecutter repository

#95 sierra-moxon closed 1 year ago
0
Using inflect library to depluralize class names when generalizing.

#94 cmungall closed 1 year ago
0
can any of the importers or generalizers infer that 0/1/True/False etc. are of type boolean?

#93 turbomam opened 1 year ago
0
Improved docs for annotator

#92 cmungall closed 1 year ago
0
poetry cli target for import-sql

#91 sujaypatil96 closed 1 year ago
1
Added toml generalizer

#90 cmungall closed 1 year ago
0
Use json2python-models as a generalizer

#89 cmungall opened 1 year ago
0