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Sources in Israel told me this potential sublineage started growing in the circulating samples (community, no connection to imported cases) from mid-end November.
**Description**
**Sub-lineage of*…
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Proposal to broaden AY.41 definition to ORF1b:1257V, S:1167V, ORF1b:1643V + Orf1B:K82R as proposed by @corneliusroemer in #237 .
This would comprise the proposed sublineage in #436
Before trying…
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Issue: as it says on the tin. Most BA.2.38 are called as BA.2 by the latest Nextclade. This can be seen by running on any sample of recent sequences from India, of which a substantial proportion are B…
silcn updated
2 years ago
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As noted first by @shay671 long ago and recently by @bitbyte2015 in #390 and re [highlighted](https://twitter.com/JosetteSchoenma/status/1491808064588156933?s=20&t=IZbs8XsupbLLEjBu8n7HPQ) today by Jos…
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@zach-hensel pointed to me that in the last UkHSA report a sublineage of BA.1 seemed to have a growth rate advantage in comparison to Baseline. So i started digging a bit and found something looking i…
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Zach Hensel noticed that the Polish lineage #301 has a reversion at Orf7A:82 [comment](https://github.com/cov-lineages/pango-designation/issues/301#issuecomment-958351061_).
It turns out there are …
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A minority of US BA.1 sequences have gained an additional mutation at N:P67S but the proportion is most pronounced in the midwest where it makes up 46% (12/26) of sequences in Illinois and 27% (51/186…
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A few people have commented that it could be interesting to incorporate case-count data. I presume we could pull this from Johns Hopkins or OWID? I also assume we'd want a standardizes count as used b…
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New lineage proposal
by Gytis Dudas (IBT, Life Sciences Center, Vilnius University)
Description
Sub-lineage of: BA.2
Earliest sequence: hCoV-19/Denmark/DCGC-298591/2022|EPI_ISL_8465418|2022-01-0…
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A sublineage of AY.4 with Orf1a:T4083M seems to grow in some european countries
First sequences : UK 33w/2021
Last sequences Switzerland 45w/2021
Total sequences: 1937 sequences (Europe: 1907)
E…