-
Right now, we have a distinct record for every row in the PREDICATIONS file. For example, we currently have 73 documents for "imatinib TREATS leukemia", each differing by the `pmid` and `predication_…
-
https://mp.weixin.qq.com/s/3wp-MYq3tJcOjQKWaf_7iw
ixxmu updated
10 months ago
-
#### What data file(s) does this issue pertain to?
**MTP Somatic Alteration tables filtered-for-gencode-v39-and-OT**
- SNV by Gene: `gene-level-snv-consensus-annotated-mut-freq.jsonl`
- S…
-
https://mp.weixin.qq.com/s/frVFzunP6yh_9DTL2kQWpg
-
#### What data file(s) does this issue pertain to?
In the v12 release, we have added new samples listed in the v12 histologies file, and hence we need to update case IDs on PedcbioPortal for new URL …
-
Thank you for this amazing package.
I have a merged cellchat object (2 individual cellchat runs using Cellchat 1.1.0).
I am getting the following error when trying to produce this figure from …
-
Hi Harold,
It seems that the canonical isoform for the UniProtKB entry P05480 has changed, so that the residues indicated below no longer match. Tyr-424 in isoform 1 (the previous canonical) is Tyr-4…
-
Correction de la documentation faite : très très bien décrite avec une description pour chaque colonne (ce qu'il n'y a pas toujours dans les autres jeux de données)
Relecture du script faite
Si on…
-
#### What analysis should be updated and why?
Update [filter-mutation-frequencies-table ](https://github.com/PediatricOpenTargets/OpenPedCan-analysis/tree/dev/analyses/filter-mutation-frequencies…
-
#### What data file(s) does this issue pertain to?
v11 Somatic Alterations tables for MTP:
- SNV by Gene: `gene-level-snv-consensus-annotated-mut-freq.jsonl.gz`
- SNV by Variant: `variant-leve…