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Hi Kai,
Congratulations on putting together a wonderful integration pipeline,i was testing this on one of our ms datasets and i encountered the following error.
[WARN][04-29 22:18] Link_TF_gene: F…
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SuRE-seq, the previous dataset I was working with, is fundamentally a promoter assay, and therefore it was hard to find many biologically relevant features other than GC content (which affects nucleos…
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I'm trying to get new terms to describe some of the data in the FaceBase resource (this project is funded by NIH/NIDCR, website at facebase.org).
1. Suggested term name: Chromatin modifier-associat…
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Hi,
We need an OBI term for Chromatin immunoprecipitation (ChIP, not ChIP-chip or ChIP-seq etc). The existing immunoprecipitation OBI term is not suitable and the high throughput assays are outside…
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urgent due to writing paper.
Is there a missing relationship between these two terms?
GO:0031509 telomeric heterochromatin assembly
The assembly of chromatin into heterochromatin at the telome…
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I based all of this on GO:0006348. GO doesn't have a CC term for subtelomeric region, but SO has a subtelomere term (pasted below). Not urgent, but will make the set of 'silencing at X' - and our phen…
mah11 updated
7 years ago
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are under
GO:0043566 structure-specific DNA binding
Interacting selectively and non-covalently with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding.
So I cou…
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When using q-value to filter peak detection (default), the lower the value the smaller is the final peak set. When using p-value, instead, the opposite happens: the lower the p-value the larger is the…
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Post your lay and scientific abstracts below. Aim for a maximum of 250 words for both. Thanks!
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Hi Paola,
Can you please create the following term as per our email discussion:
centromere assembly complex
Def:
A protein complex essential for the assembly of the kinetochore on the centromeric r…