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I have created a script that produces an example schema extension, and sample data set for saving population spike train data from simulations.
@V0L1T10N @CellAssembly @kaeldai
Feel free to fork…
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### What would you like to see added to PyNWB?
Hey all,
This came up originally in https://github.com/dandi/helpdesk/discussions/71 that the NWBInspector failed to run on a certain NWBFile. Turn…
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@t-b asked and provided a sample file on dandi slack channel, which seems to validate "fine" if
```shell
$> python3 -m pynwb.validate 496035.05.02.nwb
Validating 496035.05.02.nwb against cached n…
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### Problem/Use Case
Currently, orphaned containers i.e. containers with no parent result in a raised warning. This should raise an Error instead.
The relevant code is in pynwb.form.build.map.Obje…
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**Is your feature request related to a problem? Please describe.**
Currently only icephys series types or TimeSeries are supported when writing nwb files. However, some analysis tools, e.g. [spikeint…
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I am trying to read [this file](https://figshare.com/articles/EC9_B53_nwb/9631901) using matnwb. It does not work with the current schema, due to backward-incompatible changes to the schema since the …
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### What happened?
Trying to use the `set_dataio` method on a `VectorData` object to compress data that has been added by row
Using the trials table as a simple example, see code for my failed att…
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### What happened?
A large proportion of the experimental data recorded within our lab uses two or more Neuropixels probes (recorded with SpikeGLX) simultaneously. Each probe recording is then clus…
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@njmei
The original idea was that ipfx and MIES use the same nwb schema version.
As there is currently no support for multiple schema versions in one NWB file. I also doubt that this can be ever do…
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Despite our best efforts, it is possible to use PyNWB to write a file that does not validate against the schema. Users should be aware that the file that they just wrote does not comply with the schem…