-
**Still working on this**
In this issue I will compile terms for inclusion (either imported or newly created) in VIDO pertaining to immune responses. I also suggest viral immune response specific axi…
-
Hello Jens,
I tried to use gemoma to annotate the genome and
the input format for gff file is the same as the test data so I don't understand why it didn't work out
java -jar GeMoMa-1.9…
-
Beginning with sequence-based searches of the literature via PaperBLAST and using the sequences acquired from PomBase, UniProtKB
-
Inputs
- [x] Annotation Column containing batch information
- [x] Secondary test annotation column to confirm batch correction won't confound test variables
- [x] threshold for colinearity test
…
-
Hi,
I'm trying to use Tephra to generate the TE library for Caenorhabditis briggsae (GCF_000004555.2_CB4_genomic.fna). I downloaded the docker image from Docker Hub and successfully ran the contai…
-
Hi again.
I tried to run the following step:
```
foregroundfile="sample_rep1-%.final.lig"
backgroundfile="sample_rep1-%.expression.lig"
nameParam="--fore $foregroundfile --back $backgroundf…
-
| | |
| ---- | ---- |
| **Label** | Preparation Type |
| **Definition** | A term used to classify or describe an object that indicates the actions that have been taken upon it and/or the processe…
-
Love the new front page. I thought I should check the enrichment tool again.
I tried an enrichment with the complete set of 456 fission proteins annotated to "mitotic cell cycle"
This was the r…
-
Looking at some Tomte results I realized that the files delivered (both vcfs and tsvs) contain the ACC number instead of the family number. In the vcf it's on the vcf header and on the tsv it is one o…
-
Hi all, @YiqunCao @Puriney
Ive been struggling a lot to generate geneswitches for my seurat object. Somehow I succeed to binarize my experiment, but when i use the find_switch_logistic_fastglm I g…