-
This has to be in:
- [x] fix the issue of disappearing C-termini in Rosetta
- [x] mdff and makepsf should have options to add extrabond file and add own restraints
- [x] regenerate chain ID of -res…
-
# Establish XML Standard for Chain of Thought within JSONL for LLM Training
## Objective
Create an XML standard for structuring Chain of Thought (CoT) data within JSONL files for our open-source A…
-
### User Story
As an OSCAL model developer, I need a succinct way to view, understand, and propose refinements to the model.
As a new OSCAL user, I need a succinct technical overview of the OSCA…
-
**Summary of issue**
`vis/python/plot_mesh.py` was first added to the repository by @jmstone in 0a10fa8a53e115032013a2dc5d2e4775b89d998c on 2016-04-14 and later generalized to accept `-i`, `-o` fla…
-
Just an issue for me to drop notes.
-
Define and implement a few benchmark models that can be used to measure (improvements in) model assembly time.
Suggested criteria:
1. There should only be a few (say, 3-4) benchmarks.
2. The tot…
-
## Currently
Findings and other clj-watson messages are written to stdout.
(And interesting logging from deps is written to stderr).
This seems fine for unformatted output types `stdout` and `st…
lread updated
2 months ago
-
Running AMR strong scaling tests I encountered a significant slowdown on GPUs when the mesh is being rebuild, e.g.,:
```
Setup complete, executing driver...
cycle=961 time=1.3788538641740994e-03 …
-
**Description**
The example/points directory is relatively ancient, but still instructive. It has been written long before the present search capabilities have been added to p4est. To make it run, …
-
- Aids integration with test tooling (e.g. REST testing in SoapUI).
- Makes it easier to get the correct OpenAPI spec for that Nuts Node version (without having to look up and download the correct ve…