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ryanmcgreevy
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ModelMaker
ModelMaker plugin of VMD
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Bug in modelmaker refine
#53
sklumpe
opened
5 years ago
1
Choose Modeller Scoring Function
#52
ryanmcgreevy
opened
6 years ago
0
quick_mdff multiple map support
#51
ryanmcgreevy
closed
6 years ago
1
SS analysis
#50
ryanmcgreevy
closed
6 years ago
5
Fragment file generation
#49
trudack
opened
6 years ago
1
Feature List
#48
trudack
opened
6 years ago
0
pdb2seq
#47
trudack
closed
6 years ago
1
Clustering Methods
#46
ryanmcgreevy
opened
6 years ago
1
ModelMaker does not work anymore
#45
trudack
closed
6 years ago
1
MDFF extrab option
#44
trudack
closed
6 years ago
1
Refinement delets residues
#43
trudack
closed
6 years ago
7
MDFF Module path to input structure
#42
trudack
closed
6 years ago
1
Ab initio and insertion Analysis
#41
trudack
closed
6 years ago
1
Issue List for 1st Release
#40
trudack
opened
6 years ago
7
Error with makepsf
#39
trudack
closed
6 years ago
5
Homology Modeling with Modeller
#38
trudack
opened
6 years ago
8
Analyze only the best N structures
#37
trudack
closed
6 years ago
1
prepare pdbs for Rosetta
#36
trudack
closed
6 years ago
1
bug in analyze
#35
trudack
closed
6 years ago
8
MDFF with gridcoupling based on local resolution map
#34
trudack
opened
7 years ago
1
enable the cross correlation coloring function
#33
trudack
closed
6 years ago
2
predict insertions
#32
trudack
opened
7 years ago
4
Restart Function for abinitio and insertion structure prediction
#31
trudack
opened
7 years ago
0
Secondary Structure Pattern Selection
#30
trudack
opened
7 years ago
3
subseq command
#29
trudack
closed
7 years ago
1
Stop ModelMaker if rosetta fails
#28
trudack
closed
7 years ago
1
full length model
#27
trudack
closed
6 years ago
0
Deprecation of scoring functions
#26
maxscheurer
closed
6 years ago
4
MDFF Module
#25
trudack
closed
6 years ago
14
Anchor residue as VMD selection
#24
maxscheurer
closed
7 years ago
4
Anchor residue as VMD atom selection
#23
maxscheurer
closed
7 years ago
1
Refinement Modes
#22
ryanmcgreevy
closed
7 years ago
9
full length model input
#21
trudack
closed
7 years ago
2
Add log files to abinitio, insertion, and refine
#20
trudack
opened
7 years ago
0
modelmaker refine
#19
trudack
closed
7 years ago
3
Add sequence command
#18
trudack
closed
7 years ago
1
Model Maker on Cluster
#17
trudack
closed
6 years ago
4
Add structure check command
#16
trudack
opened
7 years ago
1
Full_length_model
#15
trudack
closed
7 years ago
5
Gapfinder
#14
trudack
opened
7 years ago
4
Platforms/binaries cause errors
#13
maxscheurer
closed
6 years ago
9
Feature request (from Till): prepare folders for submission on cluster
#12
maxscheurer
closed
7 years ago
1
Errors with rosetta refine
#11
ryanmcgreevy
closed
7 years ago
3
Refactoring fixed file paths/path handling in general
#10
maxscheurer
closed
7 years ago
1
Reconciling differences between latest tutorial version and git version
#9
ryanmcgreevy
closed
7 years ago
4
Rosetta Binary "deduction"
#8
maxscheurer
closed
7 years ago
1
start_rosetta_insertion output incorrect resid
#7
ryanmcgreevy
closed
7 years ago
1
full_length_model and fragment files
#6
ryanmcgreevy
closed
6 years ago
0
input file names
#5
ryanmcgreevy
closed
6 years ago
0
use of fixed paths and handling of paths in general
#4
ryanmcgreevy
closed
6 years ago
1
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