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I'm trying to install MulticoreTSNE into a Docker image built on top of the Jupyter Minimal distribution (Anaconda Python, etc.). Previously I was able to run this without a hitch. I've tested the fol…
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Just had a user request for adding a color-blind color pattern for the UMAP display.
We could follow the suggestion based on Wong B's manuscript[, "Points of view: Color blindness." Nature Methods…
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I've been trying to get this to work with sparse matrices.
The setup:
```python
>>> import pynndescent
>>> import scipy.sparse as sp
>>> x = sp.random(1000, 1000, density=0.01)
```
Next, I …
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I'm trying to port https://beta.observablehq.com/@fil/tsne-js (made with https://github.com/karpathy/tsnejs) to tfjs-tsne, and I hit two problems:
1. the kNN procedure takes forever
2. then the mo…
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- [x] I have checked that this issue has not already been reported.
- [x] I have confirmed this bug exists on the latest version of scanpy.
- [x] (optional) I have confirmed this bug exists on the m…
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I wonder if this two funcs r only matched with tSNE in reduceDimension(reduction_method = 'tSNE', verbose = T),cause if I use DDRTree or ICA , the next raise an error
![image](https://user-images.git…
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Hi,
I have noticed that SG- tSNE usually requires following extra libraries when build over a fresh Ubuntu.
- libmetis-dev
- libtbb-dev
- libfftw3-dev
- lib32gcc-7-dev
- libflann-dev
- l…
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It will be very comvenient if you add this feature.
Thank you.
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I have tried many ways, but I can't install the tsne and Qwepoch packages. I hope to get an answer. Thank you
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Hi, Thank you for developing this great tool. And I need a little instruction in maybe the final step , after nearly a month of struggling, I finally got the output file through run these command lin…