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Hi, thanks for an awesome tool.
I ran this without error until it hit step 15:
is there anyway perhaps to just turn of dendogram drawing?
is it due to the downsampling?
```
Error in obs_de…
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https://mp.weixin.qq.com/s/8pQuvX5NUY4FFctZ80mKbg
ixxmu updated
5 months ago
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## Description
Currently mergeBam rule takes a long time to complete (about 24h in `grandmarmot`) with a significant increase over the previous version (10.0.5). It would be nice to optimise this r…
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**Describe the bug**
When processing variants in specific regions a critical exception occurred: `java.lang.IndexOutOfBoundsException` with a negative `bitIndex` value.
After restarting the anal…
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https://mp.weixin.qq.com/s/I0_pcmH0P9PV3o9uOgkZ6A
ixxmu updated
8 months ago
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**Is your feature request related to a problem? Please describe.**
Today we don't keep track of the input files in BALSAMIC. We need to have a log file where the input fastq files are stated.
**De…
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https://mp.weixin.qq.com/s/mIItweNYaDjW6tL8xT_hkA
ixxmu updated
11 months ago
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#### What data file(s) does this issue pertain to?
#### Put your question or report your issue here.
Per the QC code run [here](https://github.com/d3b-center/OpenPedCan-analysis/pull/417), we will…
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- [x] Complete all steps in MVP on Biowulf
- [x] test the pipeline with E2E on Biowulf
- [ ] test the pipeline E2E on ec2 instance
- [x] Add case name hierarchy
- [ ] Run the pipeline on AWS with 10…
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https://mp.weixin.qq.com/s/IujcPhKM1SHKgPLTwGyZfg
ixxmu updated
11 months ago