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There is a mismatch on how some properties are named.
For example `tumour: true` is sometimes called `is_tumour: true`
elevu updated
2 months ago
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Hi all,
First of all thank you so much and congrats for your great job.
I have a 3D dataset with very small size of tumor in each image.
I do not have any ROI mask, I only have the images and the g…
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Thank you for your fantastic work!
I have some minor questions.
It seems that the heatmaps you show in the paper are post-processed.
First, the heatmaps you show are only part of the slide rather…
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Hi.
I have a question about TitanCNA result.
I got results of 11 WGS data using snakemake.
But, in only 1 sample, optimalClusterSolution.txt was empty.
Only column names are there.
Also, I found …
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I'm running through your 10X tutorial and I'm not sure why you have this line of code? `mm` is never used again in the tutorial.
`mm
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:red_circle: **Title** : Brain Tumor Detection Model
:red_circle: **Aim** : Brief approach for this project from a basic level upto highest possible accuracy.
:red_circle: **Brief Explanation** :
…
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Hello,
I have got the output files for tumor only BAMs. I would like to run Plot.R script. But I dont know which file I should use as input to Plot.R.
Here are 3 my outfiles:
tumorBam.MSI
tumo…
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The ES index built by merge_generated_metadata.py assumes 1) there's a normal and tumor and 2) there's only one run of each analysis. This is wrong, there can be multiple tumors per donor. Also, we …
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Hi,
I wanna report a problem.
I use scholar.py to collect citations of papers. Generally, it works fine. But some queries have no any retrieved result (They are supposed to have results because I tri…
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As was mentioned in #105 , I'd like to share some more details:
In our tumor sample, there is a deletion on TP53 at chr17:7574025, as is shown in IGV screenshot below:
![](http://jijiantuchuang-…