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### What happened?
When starting the second brain I receive the error in the screenshot below and it doesn't load.
I have tried to clear out the plugin data. And Ollama is running.
### Error St…
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# Description
Given that we have multicentre MS 3T MP2RAGE data that includes the brain and spinal cord, and also that some models have been developed to segment MS lesions in the brain (robust even …
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Hello, I have run into trouble when attempting to use segmenter.py. I have axial volumes, (25x128x128), and attempted to use the pre-trained models in MU-Net-R to run segmenter.py on these scans. The …
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Maybe this is already possible? But I have 6 10x Visium datasets that I would like to upload to 1 shiny app for data mining and sharing. If possible, would the best approach be to construct 1 master S…
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Quite often projects do not adopt BIDS due to complexity or not perfect fit, and then establish new a file layout and/or metadata convention/standard while saying they are "BIDS-like". **The likeness…
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This is not strictly a bug but I believe Nilearn could more efficiently compute GLMs by restricting itself to the provided mask.
I use Nilearn version: 0.10.0
### Specific example:
I have tw…
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Prior to the release on EBRAINS:
- [x] Store niftis at the data-proxy/temp
- [x] Convert niftis to neuroglancer/precomputed and store at the data-proxy
- [x] Update configurations of prerelase Juli…
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Currently we have a number of `impl Default` on classes that have a `new()` function that load data. The data is usually singleton but doesn't need to be (see SentenceSegmenter for instance).
This …
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> brain.integrated brain.integrated brain.integrated brain.integrated exportFromSeurat(brain.integrated, 'my_experiment.crb')
Error: Column specified in `column_sample` not found in meta data.**
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@v-sundaresan
Hello, I'm stuck on using your prepare_microbleed_data command.
Can you tell me how I'm supposed to specify the directories for the input images and output images by showing me a spec…