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https://mp.weixin.qq.com/s/YGCWkrgAJXt-IxiC_s-2IQ
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/YuePan027/MICSQTL
Confirm the following by editin…
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https://github.com/BIMSBbioinfo/deconvR/blob/19a3b0f42aa10c7c7c4fbcd52d585f3168fed1f2/R/findSignatures.R#L43
I don't fully understand what this function does? it looks like its filtering based on var…
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#### What analysis module should be updated and why?
https://github.com/PediatricOpenTargets/OpenPedCan-analysis/tree/dev/analyses/immune-deconv
Add quanTIseq to this module
#### What cha…
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https://mp.weixin.qq.com/s/NYnjfWPvjsQVlGnZlFxryg
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>>> Running cibersort
Error in rlang::call2(CIBERSORT, !!!arguments) :
object 'CIBERSORT' not found
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https://mp.weixin.qq.com/s/2lDLT9uSqozur1L4T8Bu6Q
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**Methods with R-packages in GitHub/CRAN/BioConductor**
[xCell - cell types enrichment analysis](https://github.com/dviraran/xCell)
_xCell is a webtool that performs cell type enrichment analysis …
Syksy updated
2 years ago
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https://mp.weixin.qq.com/s/y3drVOyPYgI5Cd2Y6QLTgA
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**Describe the problem concisely**.
Determining abundance of cell types (or expression of NMF programmes, etc) across spatial locations by integrating single cell or single nucleus RNA-seq and spatia…