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quick-and-dirty documentation:
First, make sure to select the correct interpreter: SHIFT+CMD+P, then select SCT's conda:
![image](https://github.com/spinalcordtoolbox/spinalcordtoolbox/assets/24…
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Project Lead: @bonetcarne
Mentor: @zebetus
Welcome to OLS-1! This issue will be used to track your project and progress during the program. Please use this checklist over the next few weeks as you…
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Hello Developers! I am running QC pipeline for my DTI files. However, I am facing issues with the execution. I have tried updating my packages to latest versions but still no help with the issue.
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#### Traceback
It probably only occurs with `environment_gpu.yml`:
```vim
(dmri_seg) [tb571@grx06 cnn-test]$ ipython
Traceback (most recent call last):
File "/data/pnl/soft/pnlpipe3/miniconda…
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A `gcc` related error occurs in GPU machines `grx03` and `pnl-maxwell` when `psutil` is attempted to install as part of `conda` environment inside `- pip:` block. They both have `gcc -V`:
> gcc (GC…
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Dear experts,
I was reading a post about the [optimal parallel diffusivity](https://github.com/daducci/AMICO/issues/114#issuecomment-881552431) and I was wondering if the approach of fitting by usi…
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Many extensions with to the BIDS format create a wish list of useful sequence details without clear instructions regarding how to implement these. It would really help to have sample DICOM files from …
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With python 3.8 I currently see:
```python
Treating this as a non-FLAIR scan as instructed.
Traceback (most recent call last):
File "git/dmri_segmenter/brine.py", line 35, in debrine
obj = …
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### Summary
The Head Motion Correction (HMC) did not perform normally.
### Actual behavior
Here is a minimal example:
```
from nipype.workflows.dmri.fsl.artifacts import hmc_pipeline
hmc…