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### Describe the bug
How do I fix this?
### Reproducing steps
I was modding fnas 1, th…
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Trying to run CAMISIM to generate a very small test metagenome data set with a mixture of eukaryotic and prokaryotic genomes to test a pipeline with, following the example in the usage guide. I am get…
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There are a number of non-microbial organisms in the training database. This is _significantly slowing down the training step_, as CMash was designed with **small** microbial organisms in mind For exa…
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### Sequence of actions:
1. Install script https://socialfixer.com/socialfixer.user.js
2. Go to facebook.com on LibreWolf for 1st time(which should work ok)
3. Open a new tab and open facebook ag…
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Hi, I gonna create database but I got some problems.
here is my command log.
```
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.
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rm: cannot remove '/tmp/eMRJikpDGC/gbpln214.seq.gz.nuc.fna.zst': No such file or directory
rm: can…
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Hi,
I have tried generating tab file by pasting all the filenames and paths in excel and later converted that CSV file using this command.
`sed -e 's/,/\t/g' input.csv > input2.tab`
and then …
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Hi,
I followed the wiki to create the GTDB-database and I noticed in the final step there might be some errors:
find OPERA-MS-DB/ -type f -name '*.fna.gz' > OPERA-MS-DB/genomes_list.tx
It wil…
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Dear Shahab,
First of all, many thanks for making this tool available.
We encountered some issues during the installation of the software. It seems that the scripts within the software are unable…
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FGS+ -s test-contigs.fasta -o test/ -w 1 -t complete -p 24 -m 30000 -e 1 -d 1
-e 1 option should produce the .gff correct? Still not working?
-d 1 option produces an empty .ffn file.
Plus it overwrit…
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Hello,
When executing the test script as in
```
$ PATH=$PATH:/home/moeller/git/med-team/mmmulti/plasmidid/bin TEST_DATA/test.sh || true
Executing:../plasmidID -1 KPN_TEST_R1.fastq.gz -2 KPN_TE…