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chr11 69212123 Minda_19 N . PASS SVLEN=364954;SVTYPE=DUP;SUPP_VEC=ILL_MantaDUP:TANDEM:182784:0:1:0:0:0,ILL_gridss188bf_155h,PB_severus_BND1178_2,ONT_severus_DUP1280,PB_ID_49027_2,ILL_2193678532:2,PB_…
jzook updated
1 month ago
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chr11 95796274 Minda_20 N . PASS SVLEN=5834;SVTYPE=DEL;SUPP_VEC=PB_ID_48786_2,PB_d_63,ONT_ID_38610_2,ONT_d_26,ILL_MantaDEL:184951:0:1:0:0:0,PB_severus_DEL1225,ONT_severus_DEL1326,PB_Sniffles2.DEL.2E5…
jzook updated
1 month ago
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chr10 67470511 Minda_11 N N]chr10:68211499] . PASS SVLEN=740988;SVTYPE=BND;SUPP_VEC=ILL_MantaDUP:TANDEM:170154:0:1:0:0:0,ILL_gridss174bf_4460h,PB_severus_BND783_2,ONT_severus_BND834_2,ILL_2795390560:2…
jzook updated
1 month ago
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I try to assemble herro error corrected reads with hifiasm 0.19.8
But the number of kmers seen a low number of times does not decrease as expected
Initial histogram in the log
[M::ha_hist_lin…
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Hello, I would like to use hifi and hic data to find the centromere sequence of the genome.
However, when using HIC data, a Juice Box interface may appear. Then I imported merged_nodups.hic file, and…
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Just noticed that the script tutorials in project-athena/scripts/tutorials/ still reference hifi s3 assets, which will be going away Sept 30, 2020.
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**Describe the bug**
After updating to the current release, my pi devices are broadcasting some incorrect IP addresses over mDNS.
If I ping my `hifi-office.local`, I currently see:
```
% pin…
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Hi
I have used Hifiasm-0.15.2 (r334) on Hifi reads only.
`hifiasm -o mysample_hifi.asm -t 32 mysample_hifi.fastq.gz`
Here are all the ouput files :
```
KZ-150_8_hifi.asm.bp.hap1.p_ctg.gfa
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Trying to use this library to implement the HiFiVisualizer. Everything works well with the CirlcleLineVisiualizer. Simply switching to HiFi causes an index out of bounds error. Code below..
```
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