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[IEA-process.txt](https://github.com/user-attachments/files/17434824/IEA-process.txt)
Would love to get rid of these over the next 6 months, either remove or PAINT
1. remove transposable elemen…
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Hi @krchristie @zoependlington @paolaroncaglia
I think, given the timing it would be best if we could both approach the 'response to' terms in a systematic way rather than as part of sporadic tick…
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Hi!
Following the experimental method shown in the SELFormer paper (Figure 4), we would like to analyze the drug discovery capabilities of various models.
However, the ChemBL dataset and their t…
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Some examples:
- https://tools.wmflabs.org/sourcemd/new_resolve_authors.php?fuzzy=0&name=EnviroGenomarkers+consortium
- https://tools.wmflabs.org/sourcemd/new_resolve_authors.php?fuzzy=0&name=SAPA…
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'modulation by symbiont of host signal transduction pathway' -> perturbation of host...
'modulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway' -> pertur…
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NTR: symbiont-mediated suppression of host complement activation by recruitment of host proteases
For GO-PathGO alignment
@genegodbold to provide references
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There is no clear way to use Open Force Field parameters for ligands, as the YAML input takes in mol2 and leaprc.gaff. Maybe if the ligands could be set up from prmtop and inpcrd files then it would b…
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e.g. the query
```SPARQL
SELECT DISTINCT ?item ?itemLabel ?_PubMed_ID
WHERE
{
?item wdt:P31 wd:Q13442814 ;
rdfs:label ?itemLabel .
OPTIONAL { ?item wdt:P698 ?_PubMed_ID. }
FIL…
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Today I installed the new version of MaxQuant (2.5.0.0) and I wanted to add a new protease in the configuration mode, the same way I already did it in an earlier MaxQuant version. When I entered the n…