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Hi,
I just found that the count number was used in the example data. Was the LOCOM appliable for relative abundance data?
Thanks!
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Upon running
```
fit dunnettTest(fit, alternative = c("less"))
```
The error changes slightly to:
```
Error in checkmvArgs(lower = lower, upper = upper, mean = delta, corr = corr, :
‘l…
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Add GWAS catalog file to repo. Add notebook that
- matches diseases from GWAS catalog to our diseases (perhaps use fuzzywuzzy for matching, do some manual matching if needed afterward)
- matches …
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Hi,
I am having trouble in import cell ranger 3 data in Monocle3. Earlier cell ranger 2 was working fine with Monocle2 library. load_cellranger_data is not working. Error: object 'load_cellranger_mat…
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Hello, Thank you for making this code available for use.
I am new to this kind of work and had 2 queries:
**1.** I was exploring the code to make sense of the deconvolution results, and saw that t…
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I do have a question though: so I just deployed a commit https://github.com/HumanCellAtlas/dcp-preview/pull/21/commits/6540fd5388cb08937eae2e59c033dd59394a00c4 that touched the scripts to prod. Should…
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i am unable to use mixnet in kaggle kernel, there is no pip install command to install this model in colab/kaggle or in local pc for tensorflow 2.0+
i copied code and tried to load mixnet like this :…
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Hi
after running the query against the ref database, I get the file with the results. However the antigen column reads "COVID19:ADIRP0000356_TCRB.tsv", and so on. How do I access this tsv file
Than…
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Medical exposures (all communicable/external from the body exposures)
- [x] exposure to blood transfusion(s)
- [ ] exposure to shared hypodermic needles
- [ ] exposure to non-sterile needles
- [ ]…
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# Main figures
## Figure 1
- [x] **A.** PCA of samples from PND8, PND15, Adult
- [x] **B.** Heatmap of k-means clustering on gene expression data across time points
- [x] **C.** Dot plot of en…