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as mentioned by @myrmoteras to index -
Bourlat SJ, Koch M, Kirse A, Langen K, Espeland M, Giebner H, Decher J, Ssymank A, Fonseca VG (2023) Metabarcoding dietary analysis in the insectivorous bat N…
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**Submitting author:** @adrientaudiere (Adrien Taudiere)
**Repository:** https://github.com/adrientaudiere/MiscMetabar
**Branch with paper.md** (empty if default branch):
**Version:** v0.52
**Editor:…
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The meaning of the MIxS derived description of the otu_db field – "Reference database (i.e. sequences not generated as part of the current study) used to cluster new genomes in "species-level" OTUs, i…
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Dear developer,
I'm using PR2 and mothur to do taxonomic assignment on my 18S metabarcoding data. I found that Maxillopoda, Branchiopoda, and Insecta etc. were assigned to the Family level, but the…
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Load spreadsheet known to be accepted
Get rid of all logging
Look at the current failing spreadsheet, identify the problem, and add detailed (with context) logging about the issue and inform the cur…
rija updated
6 months ago
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The command I use is
```
vsearch --usearch_global ../5_quality_control/combined.fasta --threads 8 --db zotus.fasta --strand plus --id 0.97 --otutabout zotutable.txt
```
I am processing COI metab…
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Hi, I run the rbcl analysis on BOLDigger with 3 batch size (since it is reported that it should be less than 5). However, I encountered an error with BOLD did not respond! Retrying. How can I solve th…
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Hi all, we have been approached by members of our department to begin archiving genomic materials for a long-term ecological research program (LTER) associated with our university. This program has al…
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Automatically send datasets to `peer_review` status when the associated manuscript is not accepted.
On the "Review" page of the submission system, check the most recent Manuscript object associated w…
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When I try to run my model with more than 150'000 particles I get the error
`segmentation fault `
i have tried increasing the stack size but get the same error.
What could be the problem/solut…