-
Observing the italian NeherLab build on nextstrain i noticed this sublineage with Orf1a:I4308T circulating very early in 2021 in Eastern Europe and Turkey then Germany More since there never died off …
-
While i was checking my other proposed sublineage of AY.4 with Orf1a:T4083M in #332 , i spotted this sublineage of AY.122 carrying Orf1a:T4083M too.
Interestingly this sublineage has acquired S:Q613H…
-
This potential sublineage is actually a subclade deep in an otherwise already extinct branch of Delta (21I) with ~1200 sequences (with nuc C12025T, ORF1a:P62S and S:V1264L).
Since other clade in th…
-
**Description**:
**Sub-lineage of**: B.1.617.2, Clade 21J (~6.5K sequences)
Earliest sequence: 2021/2/1 (India)
**Most recent sequence**: 2021/10/12 (Denmark)
**Countries circulating**: fairly wi…
-
Sublineage of B.1.617.2
with mutations: Orf3a: A23V
circulating in Chile (15%), Brazil (around 2,5% in the last weeks) > 1000 sequences
.
According to NeherLab:
**Earliest sequence**: 2021/4/17
**Most recent sequence**: 2021/10/15 (Jordan)
**Countries circulating**: Germany (204 sequenc…
-
Here the name property of the BioSeq object is used:
https://github.com/neherlab/treetime/blob/067711425e98d04545a630e84156495285f26a97/treetime/sequence_data.py#L164
-
**Proposed sublineage 1**
**Description**
**Sub-lineage of**: AY.4 (1202 sequences)
**Earliest sequence**: 2021/3/19(Slovakia)
**Most recent sequence**: 2021/10/1 (the UK)
**Countries circulating…
-
Build: https://nextstrain.org/groups/neherlab/ncov/europe/2021-11-02?s=hCoV-19/Indonesia/JA-GS-EIJK-RSRM-0172/2020
Sequence: hCoV-19/Indonesia/JA-GS-EIJK-RSRM-0172/2020
![image](https://user-image…