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Logs below. Seems like the errors are thrown when it tries to submit to a CUDA queue. Investigating
```
2020-08-17 14:05:00,596 - bb_pipeline_diff - INFO - Starting the subject processing: Mon…
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Hi,
I'm processing a fairly large dataset of DWI images, so the GPU acceleration that MDT offers is very desirable compared to the Matlab toolbox. Before going ahead with everything though, I'm try…
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Hi, after reading your original paper, and I tried to try your pipeline, but I found that the tutorial in the github is not so clear, I created the required output structure for the NODDI maps, and r…
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Hello Dr. Daducci,
I'm attempting to use this toolbox to fit the NODDI model to a few different datasets. The speed of the processing as compared to the original matlab toolbox is incredible! I'm h…
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Hello AMICO team,
First of all, thanks very much for putting this up! I ran into an error while running ae.fit and I wonder if you could help.
```
ae.fit()
-> Fitting "NODDI" model to 313630 v…
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Something has changed with pip/Binder/Docker/Etc, such that the old build setup for SoS is now broken. Not sure what is wrong, see below for log:
```
---> 2b1137080c9b
Step 4/6 : RUN cd $H…
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Hey guys,
I'm getting this error only on my MacOSX version of AMICO. Same code, same data runs fine on Linux.
Traceback (most recent call last):
File "NODDI_kaitlyn.py", line 48, in
ae.…
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In the CylinderZeppelinBall model the volume fraction of the Ball is not considered in the normalization of the maps.
```
# return estimates
f1 = x[ :(nD*n1) ].sum()
f2 = x[ (nD*n1):(nD*(n1+…
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Hello,
Many of my subjects appear to have values of .99 on the edges of the ICVF scans. And unfortunately, some of the subjects appear to have a mask where all of the voxels inside the b0 mask have…
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Dear,
I'm trying to run post-processing using mdt.sample_model(). I have ran it successfully at Mac but now I try to run it on Linux, it gives me the following error.
Do you have an idea what I…