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Dear Prof. Barba,
I have seen your paper in arxiv yesterday ("Reproducible Validation and Replication Studies in Nanoscale Physics”) and wanted to approach you shortly to stress that the work is ve…
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### Description of the bug
URL of the working file: http://ftp.pride.ebi.ac.uk/pub/databases/pride/resources/proteomes/proteogenomics/benchmakrs/15acadc82868c799e567dd1b219b44/
```
nf-core/qu…
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We should be able to calculate photon-echo types experiments, both with response function and equation of motion based methods.
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Hi, when trying to import search results from MetaMorpheus into Skyline or trying to create a library in Skyline using the mzID files generated by MM, we get an error. The Skyline team says its a none…
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Hi,
I searched through the issues and didn't find anyone else requesting information on this issue, I apologize if I missed one.
I'm using OpenMS (via pyOpenMS) to deisotope .mzXML files. We not…
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Add a "decoy" flag here:
https://github.com/OpenMS/OpenMS/blob/develop/src/openms/source/FORMAT/MascotGenericFile.cpp#L85
and then probably here check if it is set:
https://github.com/OpenMS/…
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Hi @theGreatHerrLebert , Thansks for your great work! I followed the README documentation but got PSM all scored as 1. So, how do I calculate and get the posterior error, spectrum q, peptide q, protei…
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It might be nice to be able to pass a user defined apodization function to the `get_flux_data()` and `get_eigenmode_coefficients()` functions. For high q devices (i.e. ring resonators) it's important …
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Slaughter, Andrew Edward created issue:
@bolic @veers @numaoa @hoffwm @colejl Use this to define what the [Mastodon] block should do.
```
[Mastodon]
[./SiteResponse]
foo = True # what Ker…
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Hello, I am deconvoluting inclusion-list and targeted RAW files for top-down proteomics. FreeStyle 1.8's "Xtract All" feature creates a new, deconvolved RAW from a larger input RAW. Unfortunately I …