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A recurring question, most recently in amir-zeldes/gum#88, has been the "double case" analysis used in English-EWT: for "out of NOMINAL", "out" and "of" each attach to NOMINAL as sister `case` depende…
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Currently a whole bunch of tools are available in the spatial portal.
1. Go through them all to see if the…
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# Context
@jahilton reported the case in [**#cell-science-platform**](https://czi-sci.slack.com/archives/C06AVGFV222/p1712859564920389).
This issue depends on [Add modality](https://github.com/…
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**Project description**
An introduction to spatial data analysis.
**Metadata**
* homepage URL: http://geodacenter.github.io
* source URL: https://github.com/GeoDaCenter/geoda
* license: gpl…
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Hi all,
(Co-opening in `rioxarray` due to the raster nature of the accessor: https://github.com/corteva/rioxarray/issues/687)
As in https://github.com/pydata/xarray/issues/8040 for DEMs, writing…
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Hi,
Wonderful job!
I have searched through many articles and am looking for a Shiny app that can handle spatial transcriptomics data in a similar manner to how [Shinycell](https://github.com/SGDDN…
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**BLUP:** What is the current state of three-dimensional feature (vector) analysis support in the R-Spatial universe?
I'm wondering what tools and capabilities R-Spatial provides for analysis of th…
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- download a data of choice from 10x genomics with `sc.datasets_visium_sge()` (you can browse them [here](https://support.10xgenomics.com/spatial-gene-expression/datasets))
- run the scanpy tutorial,…
giovp updated
3 years ago
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Do you have any function to calculate the transcriptome diversity degree and spatial continuity degree?
I saw them from the paper of "Comprehensive analysis of spatial architecture in primary liver c…
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Hi there!
I've read about updating this software to handle spatial transcriptomics data and seen the posts suggesting that it would be possible to run this with a spatial dataset, I was wondering …