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Gives an error that --show-progress is not a valid option.
If that option is removed from the bash script, it is still not able to download ventoy.
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https://www.baeldung.com/linux/logging-bash-scripts
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I have used the python script and everything worked fine and smoothly. However, as a dependancy a user of this script will need to install `python` (I already had this so it's not an issue for me).
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Read these books/guides:
- https://drive.google.com/file/d/1lMwE7lMEaWhayBcDUMZQP9Lun1wROAXN/view
- https://en.wikibooks.org/wiki/Bash_Shell_Scripting
You will have to read and write bash scrip…
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This is less of an issue, but I was wondering if it is possible to access the bash scripts used to automate each step. I am trying to adapt the code for an LSF cluster on Pegasus. Is this possible?
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avm27 updated
2 years ago
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You have two proteins examples in Predict. I assume those are your test cases, and should be well tested. However, when I run bash ./tools/Predict.sh, it failed. I checked step by step, and found the …
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See #1011
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Extraer nombre fichero y directorios de variables
https://www.cyberciti.biz/faq/bash-get-basename-of-filename-or-directory-name/
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https://github.com/daviesdrew/variantcalling/blob/d452f8cc1a6901c818d997e4c4bbdc98af42c1a2/scripts/bwa.sh#L1-L5
Is this for running CI tests? If so where is the test data?