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### Idea
Our codebase always shows coverage diff results that aren't significant. Examples:
- -0%
- 7162/33582 statements covered
I'd like to report the exact number of statements/branches/fun…
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Hello!
I'm testing vRhyme and got stuck after 'Performing machine learning classification' step
Running on a slurm HPC system
Fresh mamba install
Inputs :
a) Single-end Next-seq reads;
b) vir…
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### What is the problem this feature would solve?
Bun currently has an option to configure coverage thresholds in `bunfig.toml`, but no way to do so from the command-line (that I can find in the docu…
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## Expected Behavior
produce an a3m file for a query sequence on a custom sequence database
## Current Behavior
Got an error message
```
Invalid database read for database data file=CustomSeqDB…
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#### Details of the scenario you tried and the problem that is occurring
Test coverage threshold in the `build.yml` file is currently set to 40 (%) to allow initial builds to execute/succeed - Alth…
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Hey there,
I am encountering the following error when running the panphlan_profiling.py script:
```
...
STEP 2. Create coverage matrix
[I] Reading mapping result file: MP3_TONGUE_DNA_Rothia_…
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Change the threshold for unit tests code coverage to 60% on CI
Prerequisities:
real code coverage is higher than 60%
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## Expected Behavior
easy-search should finish execution without errors
## Current Behavior
Error during pre-filter step
> Index table k-mer threshold: 0 at k-mer size 15
> Index table: …
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Once coverage is close to 100%, add configuration to JaCoCo to enforce that unit test coverage and integration test coverage is at a minimum threshold.
These checks should be independent, i.e. unit…
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## Bug Report
When running CCS on a solution that has multiple test projects that shares multiple libraries (common libraries) it generates multiple code coverage files.
Visual Studio Code Covera…