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AnantharamanLab
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vRhyme
Binning Virus Genomes from Metagenomes
GNU General Public License v3.0
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vRhyme error code
#35
kangeun-kim
opened
5 days ago
0
p
#34
clementcoclet
opened
3 months ago
0
Error. No file(s) for coverage information were identified. Check coverage inputs (c/b/s/r/u/v). Exiting.
#33
metapanpanwang
opened
3 months ago
1
Error after Performing machine learning classification
#32
Aciole-David
opened
3 months ago
1
One merged fa can't not map to 63 individual bam file
#31
Rhettbest
opened
3 months ago
2
Scikit-learn version issue ```ValueError: node array from the pickle has an incompatible dtype```
#30
erfanshekarriz
closed
5 months ago
1
Dereplication. Question.
#29
SergeyBaikal
opened
6 months ago
0
No bins generated, bug or feature?
#28
Joon-Klaps
opened
7 months ago
2
[Question] Is this for binning contigs from the same viral genome or clustering viral genomes?
#27
jolespin
opened
8 months ago
3
Error. No file(s) for coverage information were identified. Check coverage inputs (c/b/s/r/u/v). Exiting.
#26
haleyhallowell
opened
9 months ago
3
question about using vRhyme
#25
liucong2016
opened
9 months ago
1
i made a mistake. i have no idea with it. need some help
#24
liucong2016
opened
12 months ago
12
vRhyme 'incompatible dtype' in modules
#23
cam315
closed
10 months ago
2
How to prepare coverage_values.tsv file?
#22
WoCer2019
opened
1 year ago
1
Program trying to read from non-existing output file
#21
minna-miha
opened
1 year ago
6
I encountered an error using the script `coverage_table_convert.py`
#20
rdenise
opened
1 year ago
1
High number of bacterial genes in vRhyme bins
#19
ShailNair
opened
1 year ago
6
Assessing the quality of vMAGs
#18
quliping
closed
1 year ago
0
Training DATA AVAILABILITY
#17
Nianzhen-GU
opened
1 year ago
0
performing taxonomy classifications on vrhyme bins
#16
AJWing
opened
1 year ago
1
How to know which viral sequences are not used in binning?
#15
AJWing
opened
1 year ago
4
Issue on the clustering algorithm
#14
dyxstat
opened
1 year ago
1
Suitability for binning Eukaryotic viral sequences derived from SAGs
#13
felipehcoutinho
closed
1 year ago
2
vRhyme_nucmer_delta_parsed.tsv not found
#12
XiongGZ
opened
1 year ago
2
Bare minimum input
#11
AJWing
closed
1 year ago
2
Regarding dereplication of bins
#10
ShailNair
opened
1 year ago
4
Release versions format
#9
jayramr
closed
1 year ago
4
Question about the vRhyme paper
#8
Nianzhen-GU
closed
2 years ago
2
How to concatenate the contigs of vMAGs into a single sequence
#7
mijiandui
closed
2 years ago
0
input file if relative path seems don't work well
#6
zpinocchio
opened
2 years ago
1
Interpretation of results
#5
michoug
opened
2 years ago
3
checkV
#4
ntromas
opened
2 years ago
5
"ET model: Not found"
#3
KrisKieft
opened
2 years ago
0
No such file or directory vRhyme_nucmer_delta_parsed.tsv
#2
JSSaini
closed
2 years ago
14
input fasta file
#1
slambrechts
opened
2 years ago
5