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I am interested in using SKiMpy to study the interaction of the bioenergetic network (proton pumps, ATPases and associated transporter processes that are powered by the membrane potential/ion motive f…
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I tried to update some sensitivity code from FastChains (https://github.com/SciML/DiffEqSensitivity.jl/issues/610) to Lux.
The inplace version with ReverseDiff fails while the out of place version wi…
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## Problem
Since we’re looking into upgrading our whole repo to React 17, this project specifically focuses on how upgrading to React 17 will affect v8.
Related to: #16886, #17050, #20145
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The moment algorithm is quite nice since it includes enzyme capacity constraints in a more mechanistically sound way than crowding. Add like crowding as a problem modification. Also, maybe do the same…
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Example: https://mila.quebec/en/publications/
It would be nice to reuse the same code as in the Mila website. Not sure if that's 'easily' possible via RTD
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@exaexa you will love this :) Basically many useful variants of FBA include slight variations that boil down to capacity constraints on enzymes, e.g. see FBAwMC and MOMENT algorithms (which are quite …
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* **Suggested term label:**
serine-tRNA ligase complex
* **Definition (free text)**
A heterodimeric enzyme complex that catalyzes the ligation of serine to tRNA(Ser), forming L-seryl-tRNA(Ser).
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sjm41 updated
3 years ago
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Please provide as much information as you can:
* **Suggested term label:**
dihydropyrimidine dehydrogenase (NAD+) complex
* **Definition (free text)**
A heteromultimeric complex containing th…
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The purpose of this issue is to **identify misalignment** between the main repository and this one, see what improvement we can bring in any direction.
This issue fits into this effort https://gith…
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PTN000285676 adds "lipoyltransferase activity" & "lipoate-protein ligase activity" to members of the LIPOATE-PROTEIN LIGASE (PTHR12561) family, which is represented in most species by a single protei…
sjm41 updated
3 years ago