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LCSB-BioCore
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COBREXA.jl
Constraint-Based Reconstruction and EXascale Analysis
http://bit.ly/COBREXA
Apache License 2.0
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legacy & update notices in README for v2
#827
exaexa
closed
3 weeks ago
0
update CI a bit
#826
exaexa
closed
1 month ago
0
work-around equalities in coupling bounds in MAT
#825
exaexa
closed
1 month ago
0
fix grr symbols
#824
exaexa
closed
2 months ago
2
Genes not parsed if they have an "@" symbol
#823
HettieC
closed
2 months ago
1
Solve convert(StandardModel, model::JSONModel) issue
#822
josePereiro
closed
4 months ago
7
Add required compat entries for Base libs
#821
exaexa
closed
5 months ago
0
Small fix to mmdf
#820
stelmo
closed
5 months ago
0
Showcase: enzyme communities
#819
stelmo
closed
5 months ago
2
Showcase: enzyme communities
#818
stelmo
closed
5 months ago
1
Implement SMoment
#817
stelmo
closed
5 months ago
3
Add resource balance tutorial
#816
stelmo
closed
5 months ago
1
january cleanup of `next`
#814
exaexa
closed
5 months ago
1
Open the enzyme builder functions
#813
stelmo
closed
6 months ago
6
Restructure a little bit
#812
stelmo
closed
6 months ago
2
Implement community models
#811
stelmo
closed
6 months ago
4
Add a loopless modification for v2
#810
stelmo
closed
6 months ago
3
Homogenize names of functions
#809
stelmo
closed
6 months ago
5
Add max min driving force capability
#808
stelmo
closed
6 months ago
7
JUMP time limit
#807
exaexa
closed
6 months ago
5
Add enzyme constrained models
#805
stelmo
closed
6 months ago
8
Small fixes for CT 0.6
#804
stelmo
closed
7 months ago
2
inconsistent parsing of subsystems
#803
mihai-sysbio
opened
7 months ago
9
Implement quadratic functionality
#802
stelmo
closed
7 months ago
5
Implement enzyme model
#801
stelmo
closed
7 months ago
1
Start getting FBA to work
#800
stelmo
closed
7 months ago
4
Make a clean slate
#799
stelmo
closed
8 months ago
1
CompatHelper: add new compat entry for Statistics at version 1, (keep existing compat)
#798
github-actions[bot]
closed
8 months ago
1
Warning when reaction is added with metabolites not yet in model
#797
HettieC
closed
1 month ago
2
sudden outbreak of ConstraintTrees
#796
exaexa
closed
8 months ago
1
Extend core functionality
#795
stelmo
closed
8 months ago
2
Document forwarding the `--project` exeflag with ClusterManagers
#794
exaexa
closed
1 month ago
1
CompatHelper: bump compat for HDF5 to 0.17, (keep existing compat)
#793
github-actions[bot]
closed
10 months ago
2
CompatHelper: bump compat for SBML to 1, (keep existing compat)
#792
github-actions[bot]
closed
10 months ago
1
CompatHelper: bump compat for PikaParser to 0.6, (keep existing compat)
#791
github-actions[bot]
closed
10 months ago
2
Neaten the summarize functions
#790
stelmo
closed
8 months ago
7
Implement Tables.jl interface for `ModelWithResult`
#789
stelmo
closed
7 months ago
1
Import annotations better for SBML
#788
stelmo
closed
1 year ago
1
Make duplicate reaction test stricter
#787
stelmo
closed
1 year ago
4
Extend the SBO identifiers and add isa_xxx functions
#786
stelmo
closed
1 year ago
4
`check_duplicate_reaction` does not consider reaction directionality
#785
stelmo
closed
1 year ago
2
Check that function return types inferred in documentation make sense
#784
stelmo
opened
1 year ago
2
fix sparsevec
#783
exaexa
closed
1 year ago
2
Pretty print model semantics
#782
stelmo
closed
7 months ago
2
fix filename
#781
exaexa
closed
1 year ago
1
Throw error if too many arguments supplied to enzyme models
#780
stelmo
closed
1 year ago
3
Develop → master merge for 1.5.0
#779
exaexa
closed
1 year ago
1
fixed merge of #777
#778
exaexa
closed
1 year ago
0
implement expression-limited fluxes (E-Flux like algorihm)
#777
exaexa
closed
1 year ago
2
make the semantics cut
#776
exaexa
closed
1 year ago
4
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