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### Description of bug
I ran multiqc for cellranger multi output and get the error
### File that triggers the error
[web_summary.html.zip](https://github.com/MultiQC/MultiQC/files/15349383/web_sum…
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Hello,
In both HiCExplorer versions 3.7.2 and 3.5.2, chicViewpoint and chicViewpointBackgroundModel are throwing errors:
ERROR:hicexplorer.chicViewpoint:module 'numpy' has no attribute 'int'.
…
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Hello,
Where can I get hiCExplorer version 3.5.2?
Thank you.
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Hi,
I'm trying to use hicBuildMatrix using the following command line:
hicBuildMatrix -s file_1.sam file_2.sam -o builded_matrix.h5 --QCfolder ./Building_Matrix/ --binSize 10000
It returns:
…
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Hello,
is there any idea to calculate the difference between two cool balance matrices? I know hicCompareMatrices can (https://hicexplorer.readthedocs.io/en/latest/content/tools/hicCompareMatrices…
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Hi!
I am working with Juicer hic file to convert cool format for matrix analysis. During converting, I have an error ***"buffer size must be a multiple of element size"***.
Do you have any recommend…
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### Description of bug
I'm trying to process multiple thousands of samples with about 10 modules' result files per sample. To process 2000 of my samples, it took MultiQC nearly 100GB of RAM to comple…
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_Commit_:
The ICE normalization in Higlass and Hicexplore are differnt.
https://drive.google.com/file/d/1Wm-wPGM7JQrrNistgKbMfPUJZ_khcL5s/view?usp=sharing
#### Steps to reproduce
1. I apply Hi…
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Hi author:
When i run cooltools to identify the A/B compartment, I get an error message that 'Unable to open object (component not found)'. I guess this is input file err. I using the HiCExplorer c…
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Hello,
I was wondering if the aligned bam file from bwa needs to be sorted or can we directly input it into hicBuildMatrix.
Thank you