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Thank you for the great package.
I am trying to put y-axis scaling on my whole genome bisulfite sequencing data (0 to 100 methylation).
I have come across the annoYaxis function has the correct…
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Dear all,
The proposal has been made to obsolete
GO:0036451 cap mRNA methylation
GO:0097309 cap1 mRNA methylation
GO:0097310 cap2 mRNA methylation
see https://github.com/geneontology/go-ontol…
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### Ask away!
hi, I am running this analysis again for other non-model species:
nextflow run epi2me-labs/wf-human-variation --bam final_merged.bam --basecaller_cfg 'clair3:dna_r10.4.1_e8.2_260bps_…
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
2.1.0
### Workflow Execution
Command line (Local)
### Other workflow execution
_No response_
### EPI2ME V…
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The annotations in this list
https://www.pombase.org/term/GO:0006396
indicate that RNA processing terms *mostly* align 1:1 with MF terms.
e.g
~box H/ACA RNA 3'-end processing~
~7-methylguan…
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Dear all,
The proposal has been made to obsolete GO:0006306 DNA methylation
see https://github.com/geneontology/go-ontology/issues/26602
Experimental annotations that need to be reviewe…
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GO:0090116 | C-5 methylation of cytosine
GO:0032775 | DNA methylation on adenine
GO:0010424 | DNA methylation on cytosine within a CG sequence
GO:0010426 | DNA methylation on cytosine within a …
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Hi,
How may I fix this run error for executing the _S. cerevisiae_ test case, using your `LTRpred`?
BTW, the 1st test with Hsapiens_ChrY_ltrpred input completed without any error or warning me…
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Hello Emile and group! Excited to try your program on my Histoplasma datasets but I have hit a couple of snags, some I've solved but currently stuck on this one.
I have been following your tutoria…
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Dear all,
The proposal has been made to obsolete GO:0070734 histone H3-K27 methylation & children
* GO:0061086 negative regulation of histone H3-K27 methylation
* GO:0061087 positive regulatio…