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HajkD
/
LTRpred
De novo annotation of young retrotransposons
https://hajkd.github.io/LTRpred/
GNU General Public License v2.0
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How to pull LTRpred in singularity
#28
Ramkyeri
closed
1 year ago
1
Error: Column `cn_3ltr` must be length 48 (the number of rows) or one, not 0
#27
MarquisMo
opened
1 year ago
1
Running LTRPred
#26
Ramkyeri
closed
1 year ago
3
Issue with running with singularity
#25
skyungyong
closed
1 year ago
7
"Error: Tibble columns must have compatible sizes" at Step 6
#24
a7032018
closed
3 years ago
2
Fasta header truncated in ltrdigest_tabout.csv
#23
a7032018
closed
3 years ago
0
ltrdigest_complete.fas_DfamAnnotation.out' does not exist
#22
sadikmu
opened
3 years ago
7
Issue with genome fasta header format
#21
acontrerasg
opened
3 years ago
0
How to fix this run error?
#20
anandksrao
opened
3 years ago
6
Fixing blank BibTeX fields
#19
arfon
closed
4 years ago
0
Paper typo
#18
dcassol
closed
4 years ago
1
Small details on the vignette
#17
dcassol
closed
4 years ago
1
Running LTRpred docker container in userspace with udocker
#16
ibebio
closed
4 years ago
6
License in the repository is missing
#15
mdozmorov
closed
4 years ago
1
Installation of dependencies fail - Docker wrapper needed
#14
mdozmorov
closed
4 years ago
9
Installation instructions of dependencies should be updated
#13
mdozmorov
closed
4 years ago
4
R installation instructions need to be updated
#12
mdozmorov
closed
4 years ago
1
Seeking advice for my test case, test run output validation, and post-processing of files
#11
gnmcsbnfrmtcsclb
closed
4 years ago
5
Error in Join solo LTR Copy Number Estimation table
#10
zyqzyqzyq
opened
4 years ago
3
could LTRpred detect DIRS/DIRS in genome contigs?
#9
wangj2009
closed
4 years ago
3
could not install biocLite.R
#8
wangj2009
closed
4 years ago
2
Error in .normarg_input_filepath(filepath)
#7
bbalog87
closed
4 years ago
11
Error: Failed to install 'LTRpred' from GitHub: (converted from warning) package ‘amap’ is not available (for R version 3.5.1)
#6
CristianRiccio
closed
5 years ago
3
How do I install and use the DFAM database with LTRpred?
#5
CristianRiccio
closed
5 years ago
16
"sh: usearch: command not found Error: It seems like you don't have USEARCH installed"
#4
CristianRiccio
closed
5 years ago
4
LTRpred installation in R failed: "Installation failed: Empty reply from server"
#3
CristianRiccio
closed
5 years ago
2
How can I solve this problem?
#2
assetdaniyarov
closed
6 years ago
1
‘httpuv’, ‘sourcetools’ had non-zero exit status
#1
assetdaniyarov
closed
6 years ago
1