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The current implementation of RESP charge fitting is slow. Although RESP charge fitting is intended to use for postprocessing and only for single configuration, I am interested in developing cuda/open…
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runCorrelation
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Is it possible to use NOMAD in parallelization both for python and matlab?
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I am wondering if tis possible to parallelise msCentipede.
I am running an analysis of all JASPAR motifs using several differetn ATA-seq samples, and its running so low ( only 20 motifs for one sample…
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A first version of the Open MP parallelization has been implemented but, for now, there is an small problem concerning detailed balance. It must be carefully studied.
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Originally I parallelized tests using a round-robin approach: when each worker process finishes running a test, it asks the supervisor which test to run next. When you get down to the final tests, thi…
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This will be complicated and require some thought.
The step class currently has a run method that compiles all the params into kwargs, then runs them through main. I would like to move the paramete…
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Hi, thanks a lot for a great and scalable implementation!
I don't have an actual issue, just a note for people who have access only to CPUs, but need to process a lot of patients: the implementatio…
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Let's support parallelization via child processes.