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1) In https://github.com/calico/basenji/blob/master/bin/akita_data_read.py#:~:text=seq_hic_obsexp%20%3D%20np.log(seq_hic_obsexp), in line 204 of akita_data_read.py while using https://github.com/calic…
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### 1.3 sentiment analysis (10 points)
**C.** Add the four sentiment scores to the `doj_subset` dataframe to create a dataframe: `doj_subset_wscore`. Sort from highest neg to lowest neg score (so m…
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The README says vectors can be represented in spherical coordinates. It's true that you can get spherical coordinates out, but I don't think this is actually implemented for constructing vectors. That…
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Hi, I can not get the number as in the paper for BIWI Test-A which is 5.3742 x mm^-4.
The following is what I've tried:
1. Rotate/scale/translate the raw data to align to the templates in your re…
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Any hint code on calculating SDF and do we need to translate it to camera coordinate and calculate?
or we can use the world-coordinate one for fitting?
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Hi, I am a graduate student who is trying to use nnUNet in Colab.
I tried to run nnUNet preprocessing on the Liver dataset in Medical Decathlon Dataset with the Google Colab. But I found I will alw…
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## Dataset
Notable info about the Karolinska dataset:
- Composed of T2-sag, T2-ax and T2*-ax data per patient.
- ~54 patients
- already under git-annex of data.neuro.polymtl.ca
- We can assume…
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I'm trying to load the DIR-lab 4DCT dataset, but I've run into some trouble.
I downloaded the dataset from dir-lab.com, and applied the following pre-processing steps:
> -downloaded all 10 data …
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Thanks for your great work, it’s given me a lot of inspiration.
I have a question about multi-organ segmentation, which is training the model using multiple different organ (tumor) datasets.
In …