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I try
```python
import multiresolutionimageinterface as mir
reader = mir.MultiResolutionImageReader()
mr_image = reader.open('camelyon17/centre_0/patient_000_node_0.tif')
```
there is no error …
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### 您好,请问下面的tumor_train.txt 和 normal_train.txt是怎么生成的呢?前面的步骤中只有train_spot.txt,多谢您的解答。
## 获取补丁数据集
python CAMELYON16/camelyon16/bin/patch_gen.py /WSI_TRAIN/ tumor_train.txt /PATCHES_TUMOR_TRAIN/
pytho…
qzsrh updated
3 years ago
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每個xml所產生的mask.tif經過computeEvaluationMask皆只有返回一個腫瘤
ex . test_004.xml具有3個腫瘤註釋,但是生成的mask tif文件返回1個腫瘤
xml to tif
reader = mir.MultiResolutionImageReader()
mr_image = reader.open('../images/test_021.t…
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Hi,
Here may be a bug ,
In Line 28 of camelyon16_preprocessing/scripts/1_convert_annotation_to_json.py,
X = list(map(lambda x: float(x.get('x')) should be changed to
X = list(map(lambda x: float(x…
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I am working with .tif files from the CAMELYON16 Dataset and that does not provide any rule files, can I still use this tool to generate hundreds/thousands of patches from each tif file?
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## Context
**Issue type** (bug report or feature request): bug report
**Operating system** (e.g. Fedora 24, Mac OS 10.11, Windows 10): Ubuntu 16.04.6 LTS
**Platform** (e.g. 64-bit x86, 32-bit A…
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使用提供的模型参数进行测试,发现FROC只有0.39 AUC只有0.9660。 想请教作者是如何将该FROC提升至0.79的? 目前来看性能差别有点大。
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您好,我train前生成了3个Patch目录,分别是:
normal.tif生成的normal_patch/;
tumor.tif生成的tumor_patch/;
tumor.tif生成的non_tumor_patch/;
一起放在/home/zbs/camelyon16_data/training/目录下,
我在cnn.json中给出的 "data_path_train": "/ho…
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The dataset I am working on has annotations in TIFF format. Is there a way to incorporate that into this work easily?
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**您好,我想问下文件的路径怎样设置?**
parser.add_argument('xml_path', default=None, metavar='XML_PATH', type=str,
help='Path to the input Camelyon16 xml annotation')
我发现只能将default值改为某个文件的路径,比如.…