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- [x] write about visualization.
- [x] Read background
Todos:
- [x] Title including transcript id, protein id & name
- [x] transcript tract: get exon lengths from `tx_coordinates.get_cds_regions…
ielis updated
4 weeks ago
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The cns that is installed with haddock3 is linked to libquadmath on linux/amd64 and libgfortran5 on linux/arm64.
## **Module/Workflow/Library affected**
any cns powered module
## **Expected b…
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Adjust the download option for the glycosylation table to optional support a list of filters (#1712) to allow users to download the filtered table rather then the complete table.
**Dependencies**
…
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It looks like the bond order is being passed as a `Single` rather than an `int` which is causing a comparison failure:
Example:
```
benzene_complex_system = ChemicalSystem(name=, components={'l…
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Bill Phipps reported that this command line yields an error on his Windows machine:
`crux spectral-counts --parameter-file 181026_Amyloid_Collected_181024_Comet_Linux/parameters.txt --find-peptides…
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I can't see the pride cross references in the cross-references section of the protein page or on the api.
For examples, in `/data/projects/glygen/generated/datasets/unreviewed/human_protein_xref_p…
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https://www.pombase.org/results/from/id/cbf69340-87d8-4110-96eb-25252d2da43f
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After making the protein synthesis function we need to make some sort of heuristic that compares the old genome to the new one. Basically we compare the proteins made by the previous genome and the al…
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could be a nice integration or alternative in the stability module, to be benchmarked first against the current consensus approach once we have collected the proteins from the different benchmarking d…
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* **PTHR ID & PTN node:**
GO:0031623 | receptor internalization | IBA with P50570 , 727949 , 71096 , 2513 , PTN008520579
* **Sequences with problematic annotation (ID + gene/protein name):**…