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```
15:52:05 Config file: ./config/downstream/GO-BP/gearnet_yy.yaml
15:52:05 {'dataset': {'branch': 'BP',
'class': 'GeneOntology',
'path': '/scratch/user/yuning.you/p…
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I used ClassificationModel for my dataset training. However when I called the `model.eval_model()` function on my test dataset, I got different scores of "auroc" and "roc_auc_score". Code is like belo…
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The dataset is heavily imbalanced with only a very small percentage of records being for a TBI.
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Set the default parameters to the following:
- Minimum number of positive genes is 15
- Number of folds is 3
this can be changed directly in `geneplexus.py`; use as an input parameter to the func…
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Trainer에 누적 학습마다 평가지표를 Logging할 수 있도록 설정해주어, wandb로 넘어갈 수 있도록 돕는다
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모델 선정을 위한 최적 모델 도출 실험 관련 issue입니다.
(04/01) 최적 하이퍼 파라미터 setting은 다음과 같습니다.
- 모델: RL(roberta-large)
- 리더보드(epoch/4000): **micro_f1 score: 73.7197| auprc: 76.0731**
- 리더보드(epoch/3000): **micro_f…
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In the paper, GENIE3/A was briefly mentioned to be a re-implementation of GENIE3, presumably for parallelizing (Dask).
However, in the comparison diagram, GENIE3/A consistently outperformed GENIE3 …
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Dear Kexin,
Great work!
When I tried to run the training code: `CUDA_VISIBLE_DEVICES=0,2,3,4,5,7 python train.py --task biosnap`, it gave me the following error:
```
Let's use 6 GPUs!
--- D…
pykao updated
2 years ago
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https://m.cnbeta.com/wap/view/1316665.htm
ixxmu updated
2 years ago