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I have very basic questions.
I already generated loom files using velocyto from cellranger filtered matrix and bam files. Now if I am interested in running decontX, do I use the filtered matrix as …
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## Aim
To make data findable, and rigid folder structure of output is needed that clearly describes content, version, and logical grouping.
## Desired Features
- Minimal folders to navigate.…
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I am trying to use tbpore on some data sets for the first time. I have installed the software, the database and other dependencies (both using conda and pypi). However the pipeline fails whenever it g…
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### Model introduction
WaveCoder 🌊 is a series of large language models (LLMs) for the coding domain, designed to solve relevant problems in the field of code through instruction-following learning. …
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**Which tool should be included?**
FCS Adaptor and FCS-GX
**How is it used?**
https://github.com/nf-core/modules/tree/master/subworkflows/nf-core/fasta_clean_fcs
**Which workflow should it b…
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Do you have plan to create the reference genome with virus masked?
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Hello, thank you for your team's contribution to decontamination.
I found some microbial cohort from the public database, but there is no negative control or DNA concentration information, is there …
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Hello!
I have been unable to load the following packages: devtools, decontam, and phyloseq on Raven. Each time I get an error message that says it is either not compatible with the version of R, or…
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### System Info
peft v0.10
### Who can help?
@pacman100 @younesbelkada @sayakpaul
### Information
- [ ] The official example scripts
- [X] My own modified scripts
### Tasks
- [ ]…
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_From [Alberth2...@gmail.com](https://code.google.com/u/117559702027655025914/) on December 20, 2012 15:30:27_
Glitches are getting smaller! What steps will reproduce the problem? 1. Build a toilet r…