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GATK4 VariantFiltration
https://software.broadinstitute.org/gatk/documentation/tooldocs/4.beta.3/org_broadinstitute_hellbender_tools_walkers_filters_VariantFiltration.php
I have no other ideas w…
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Splitting this off from #252 -- let's use this issue to discuss our desired URI convention, assuming that #258 (Bundle/Object unification) lands.
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Just installed from master using pip3 and got
```
david@david-t480 ~/g/identifier-interoperability> ga4gh_dos_server
Traceback (most recent call last):
File "/home/david/.local/bin/ga4gh_dos_serve…
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the [work-in-progress docs](https://ga4gh.github.io/data-repository-service-schemas/preview/develop/docs/#_uri_convention_work_in_progress) for URI convention suggest the form `drs:///`. But this does…
dvoet updated
4 years ago
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## Describe the bug
After setting up a an AWS EKS cluster, I followed the deployment instructions and
```
During handling of the above exception, another exception occurred:
Traceback (most rec…
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In the interest of time, #192 is being merged with changes that have not been propagated entirely through the codebase. In particular, we need to update the documentation to reflect new paths (i.e. `/…
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The example GA4GH swagger for the API is here:
http://193.167.189.73:7777/ga4gh/wes/v1/ui/#/WorkflowExecutionService
We will use this as the API design, but we need to connect this to our servic…
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Some DOS installations present private and controlled access data. To make it easier for clients to find out the proper authentication credentials to use, add a `ServiceInfo` that offers a URL for log…
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Why does the API have the endpoint `/dataset/` with a singular "dataset" and `/datasets` as plural? To my knowledge this is uncommon within GA4GH APIs (such as service registry, which uses `/services`…
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https://docs.google.com/document/d/1hj7hY2pqlMvHEI-6pM-prj0LPUo9MRxzGOTnwq85tpo/edit