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I'm using the Gemma run or the mistake I told you before, and I see this line of code on your manul.pdf,
bin/kmers_table_to_bed -t kmers_table -k 31-p phenotypes.pheno --maf 0.05--mac 5-b 10000000…
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I'm using the Gemma run or the mistake I told you before, and I see this line of code on your manul.pdf,
bin/kmers_table_to_bed -t kmers_table -k 31-p phenotypes.pheno --maf 0.05--mac 5-b 10000000…
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dear author
yesterday asked you why this chromosome is all 0, you said because there was no comparison with the reference genome, my idea now is to extract the kmer from the picture I showed you yest…
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The VCS mode now requests 5min observations for all triggers. This guarantees some VCS data can be collected for analysis. To make the observation duration more flexible, we can make use of a "vcsfree…
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As title: The diffExAnalyze ignores the -subset flag while performing differential expression. An example of the output log is attached below; the logs do not indicate anything amiss, except of failur…
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I have set `gemma.fastq.headers.dir=/cosmos/data/pipeline-output/rnaseq/fastq_headers` in `Gemma.properties` and launched the following command:
`/space/grp/bin/gemmaCli.sh rnaseqBatchInfo -u *****…
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Hello,
After updating to 3.9.191027-7971 on debian buster I can see these in logs:
```
Oct 27 11:04:36 gemma ntopng[4841]: 27/Oct/2019 11:04:36 [LuaEngine.cpp:11050] WARNING: Script failure […
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I'm not sure to understand what the static library `libgemma.a` is.
The file `README.FIRST` says:
> This is the statically linked part of the gemma32.slb which gateways
> the application to the s…
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**Describe the bug**
I am simulating a relatively larger genomic dataset for a follow-up GWAS analysis. While I was able to run an entire simulation with a smaller population when I try to simulate …
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On Fri, Sep 21, 2018 at 03:58:45AM -0700, Xiang Zhou wrote:
> Have you tried the early 0.94.1 version ([1]http://xzlab.org/software/
> gemma-0.94.1/gemma)? For multiple trait analysis, I encou…