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Dear Siomnom,
I am learning how to use PyCHAM. Since installed PyCHAM by Conda, I tried to run a simple model. However, I met always the problem of "Could not find...." (you can see the capture in …
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Cobrapy user guide explains how to do gapfilling when we want to guarantee that the organism objective is to grow or guarantee a certain metabolite is produced.
Is there a cobrapy function equivalent…
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The following calculate the geoneutrino ratios from the model output:
- [x] Add Th/U_geo (a_Th / a_U) using WebApp paper Eq. 33
- [x] Add K/U_geo (a_K / a_U) using Web App paper Eq. 34
The follow…
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I have typically been running ISOFIT on my MacOSX laptop/desktop (and in the past Docker) but have been migrating my efforts to my Linux cluster. I built a new conda environment on the cluster and in…
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Currently, glutathione is present as a metabolite needed in the biomass reaction. I cannot find any experimental indication as to why this was initially added.
A problem we currently have is that we …
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So i'm trying to create strain-specific models of p.putida similar to nogales et al 2020. I'm starting with the p.putida iJN1463 mode and have a list of genes to delete to recreate each strain. I then…
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### `brew config` output
```shell
HOMEBREW_VERSION: 3.1.0
ORIGIN: https://github.com/Homebrew/brew
HEAD: ccb05e5e0b7b925c3d6b531fa43b016fa4d0b72a
Last commit: 3 hours ago
Core tap ORIGIN: https:/…
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Goodmorning.
I have recently used your program to analyze metabolic exchanges in a community. I have only a question: in the output, I have for each metabolite two columns one called, for example, E…
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**Leo van Kampenhout < l.vankampenhout > - 2015-07-23 09:58:36 -0600**
**Bugzilla Id:** [2193](http://bugz.cgd.ucar.edu/show_bug.cgi?id=2193)
**Bugzilla CC:** dlawren, oleson, rfisher, swensosc,…
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Any plans for supporting QUIC?
It seems that currently QUIC doesn't have a lot of changes over HTTP2(same HPACK, same semantics) layer, instead its main focus it's to improve upon TCP, by replacing i…