-
Hello,
I have a simple question: My focal species is a diploid. If I generate the input file using haploid genotypes, should I specify samples as haploid or diploid?
Thanks,
Shujun
-
I m trying to install under ubuntu:bionic docker container and getting below error.
```
g++ -g -O2 -DVERSION=\"0.4.38\" -Wno-write-strings -fno-exceptions -pedantic -I ./ -I ./data_types/ -I ./comm…
-
Hello!
Could you tell me, please, why the installation instructions in the Dockerfile
(https://github.com/Ensembl/ensembl-vep/blob/19a5e9c4c6d4d45710b771341ec228623855c0c9/docker/Dockerfile) are so …
-
Hi, I am trying to extract LD information using the function `ld_search()` but it keeps returning an error.
```
> ld_search("rs420358")
Querying SNAP...
Error in curl::curl_fetch_memory(x$url$u…
-
I'm having some trouble with the "preprocessing" script and not able to generate the plot at the end.
I'm using my own data, loading in .ped and .map files and converting them with `snp_plinkQC()`…
-
-
Here are the current terminology definitions. Should they be ammended?
| Term | Definition |
| -- | -- |
|otscore|The Open Targets G2V score is an aggregation of the VEP, GTEx, PCHiC, DHS, Fantom…
-
Hi,
First of all: great work.
Second: I have a question. I made this website [https://swvanderlaan.github.io](https://swvanderlaan.github.io). Under the Publications section I list (some) of my …
-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/hclimente/martini/
Confirm the following by editi…
-
In tumor-only mode we can use correlations among variants to impute germline variants.