BRCAChallenge brca-exchange issues

BRCAChallenge / brca-exchange

Overall management and deployment of the BRCA Exchange web portal and pipeline scripts

http://brcaexchange.org

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issues

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Update config.yml

#1518 melissacline closed 5 days ago
0
Small changes re: provisional evidence

#1517 e-t-k closed 5 days ago
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Update DonationBar.js

#1516 melissacline opened 1 week ago
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Feat/newtile provisional evidence 20240811 - update help text

#1515 e-t-k closed 1 week ago
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Feat/newtile provisional evidence 20240811

#1514 e-t-k closed 1 week ago
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Testing without an explicit pip install of docker-compose , since doc…

#1513 melissacline closed 3 weeks ago
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Create a CITATION.cff file

#1512 ahwagner opened 4 weeks ago
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Attempt to fix "deploy-dev" script breaking in CI by forcing rsync to use ipv4

#1511 e-t-k closed 1 month ago
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Update the Contact Us email address

#1510 melissacline opened 2 months ago
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Updated the attrs package to clear up a dependency conflict relating …

#1509 melissacline closed 2 months ago
0
Feat/provisional evidence 20240429

#1508 e-t-k closed 2 months ago
1
Write Provisional Evidence help text to add to the Allele Frequency section

#1507 e-t-k opened 2 months ago
2
Biwas functional assay should be labeled with a blue R/P instead of a green P

#1506 melissacline opened 2 months ago
0
Fix login to dockerhub from Dev

#1505 melissacline opened 2 months ago
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Added one more file to the tarball discard list

#1504 melissacline closed 2 months ago
0
Added one missing file to the discard list

#1503 melissacline opened 2 months ago
0
Bumped the docker-compose version from 1.12.0 to 1.29.2

#1502 melissacline closed 2 months ago
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Fix variant scoring

#1501 melissacline closed 2 months ago
0
Punting

#1500 melissacline closed 2 months ago
1
Variant scoring

#1499 melissacline closed 3 months ago
0
Switched off the local UTA installation

#1498 melissacline closed 3 months ago
0
Gnomad update

#1497 melissacline closed 3 months ago
0
Genome browser update

#1496 melissacline closed 3 months ago
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Clin var update

#1495 melissacline closed 4 months ago
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Genome browser update

#1494 melissacline closed 4 months ago
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Update config.beta and prod js files

#1493 e-t-k closed 5 months ago
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Broken link on the multifactorial analysis tile

#1492 melissacline opened 6 months ago
0
Update DonationBar.js

#1491 melissacline closed 6 months ago
0
Update DonationBar.js to link to the latest blog post entry

#1490 melissacline closed 6 months ago
0
Fix #1433: Updates Google Analytics to GA4 and removes react-ga dependency

#1489 e-t-k closed 6 months ago
0
New functionality to extract the gnomAD flags from the gnomAD VCF by downloading and parsing them

#1488 melissacline closed 7 months ago
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feat: URLs now default to stable CA_IDs instead of latest variant ID

#1487 e-t-k closed 7 months ago
2
Fixed typo, added missing import

#1486 melissacline closed 7 months ago
0
Added the referencing module, updated the ga4gh.vrs requirements

#1485 melissacline closed 7 months ago
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Fixed a missing command line argument

#1484 melissacline closed 8 months ago
0
Fixing one command line

#1483 melissacline closed 8 months ago
0
Fixing a typo

#1482 melissacline closed 8 months ago
0
Wrote a stand-alone script to run spliceAI in batches

#1481 melissacline closed 8 months ago
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Automate spliceai 2

#1480 melissacline closed 8 months ago
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Update branch

#1479 melissacline closed 8 months ago
0
Update test_add_bayesdel_scores_to_built_file.py

#1478 melissacline closed 8 months ago
0
Cleaned up the code for downloading the static G1K data

#1477 melissacline closed 8 months ago
0
Merge pull request #1475 from BRCAChallenge/master

#1476 melissacline closed 8 months ago
0
Merge pull request #1474 from BRCAChallenge/update_seqrepo

#1475 melissacline closed 8 months ago
0
Update seqrepo

#1474 melissacline closed 8 months ago
0
Update automate_spliceai branch

#1473 melissacline closed 9 months ago
0
Repair vrids

#1472 melissacline closed 9 months ago
0
Switched ESP processing to downloading of static data

#1471 melissacline closed 9 months ago
0
Fixed an Improper Method Call: Replaced `mktemp` with `mkstemp`

#1470 fazledyn-or closed 9 months ago
0
Fixed bug that caused splice_ai and bayesdel scores to not be shown f…

#1469 melissacline closed 10 months ago
0