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# ~~Option 1~~
File system:
![image](https://user-images.githubusercontent.com/20953530/39461141-641efe60-4cce-11e8-97ca-37b96db78a1e.png)
When using _beri install *_, several things will need to…
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- [x] `get_*()` is cringe worthy.
- [x] `create_*()` is _meh_, but more acceptable.
- [ ] Review other naming conventions.
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Hi,
I have been using metacoder to visualize core microbiome as no. of obs (otus), and now I would like to display the core as read count (abundance).
My otu_table is unfiltered, I mean it has non-s…
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Hi @zachary-foster - I'm trying to calculate a diff table to compare some Ocean Regions in the sample mapping file, but I keep getting the following error.
1. I'm not sure why the `Confidence` col …
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This would be like `calc_n_samples` except it would return the proportion of samples in each group with greater than some number of reads.
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Hey @zachary-foster !
I'm currently trying to resolve a weird issue...
I am trying to filter a taxmap object, and I keep getting this error at the bottom.
```r
> metacoder_object
40…
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Hello, I'm not sure what the best way to leave a reproducible example is, but possibly this is just a interpretation question. I'm making a heat tree in which node colors represent the median proporti…
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Caused by android.view.InflateException
Binary XML file line #342: Binary XML file line #342: Error inflating class
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https://github.com/ropensci/taxa/blob/2956cd625d572111270e71239b8d13ef062a8665/R/taxonomy--class.R#L1079
On multiple computers, I've had issues with the `taxa::taxonomy_table` function not adding the…
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Our current way of doing this is using a function and adding the data to the global environment with:
```r
# A function for accessing variables.
get_static_data