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Due to some of the OMOP clinical vocabularies having licensing restrictions, we need to decide how and in what format the mappings will be publicly released.
Regardless of the above issue, we wil…
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Discussion today 2024-06-27 with Liam/Steve/Lawrence
Actions
- [X] prepare a pull request on https://github.com/UCLH-Foundry/ssg-omop-gen/ that allows 2 people to review the synthetic data gener…
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https://athena.ohdsi.org/search-terms/terms/2718917
It is a teclistamab beginning from July 01, 2023.
https://www.hcpcsdata.com/Codes/J/J9380#:~:text=2024%20HCPCS%20Code%20J9380%20%3A%20Injection…
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**Is your feature request related to a problem? Please explain.**
As we have defined our concept sets in #1 and are in the process of wrapping up the automation of creating these concept sets in #2…
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Are there established methods / approaches to capturing and tacking mapping / implementation decisions or approaches, particularly in implementing OMOP?
Melissa Haendel mentioned https://github.com…
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:warning: This is preliminary work and can be subject to heavy changes! It is also a work in progress and not feature-complete! :warning:
# Goal of the ECLS CDM expansion
Extracorporeal life suppo…
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We're encountering a similar issue to https://github.com/marklogic/marklogic-contentpump/issues/68 for files that are tab delimited but with unescaped quotes:
Sample:
```
11:16:43.614 [pool-1…
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why there's no replacement / Maps to links in the OMOP Genomics?
35986591 OMOP5074729 EGFR protein: Substitution in position 790 Thr replaced by Met measurement
should be Mapped to
19576591 OMOP…
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Use OMOPonFHIR to translate between the OMOP and FHIR data models.
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I'm presently having to clean the final concept.csv prior to insertion into a postgres database following the insertion of CPT4 codes via the cpt.bat process that is described upon downloading the voc…